Pseudonocardia dioxanivorans: Psed_2078
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Entry
Psed_2078 CDS
T01479
Name
(GenBank) transcriptional regulator, TetR family
KO
K22108
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdx03000
]
Psed_2078
Transcription factors [BR:
pdx03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Psed_2078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_24
TetR_N
HTH_Tnp_1_2
TetR_C_7
TetR_C_27
FMO-like
HTH_10
Sigma54_CBD
Motif
Other DBs
NCBI-ProteinID:
AEA24303
UniProt:
F4CZ12
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All DBs
Position
2211018..2211662
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AA seq
214 aa
AA seq
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MDGGPGTGAPPRGPADPVVPSSRHREIVRAAARLFDERGYHHTSMDDIAAAVGIKKPTLY
HHVPSKGRILARIHDDLADRLLGRLRERIDTGAAPAAVLLGVLEDHLELLDREPANLRCY
YEHRRELPPEDEAHSRARRDEYFAAVLAVVEDGVARGDFAVTDPRLATLAFFGVCNWSYQ
WYRPGGAMAARAIAVSFWRCFLSGIAATSTGPAP
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
gtggacggggggccggggaccggggcaccgccgcggggccctgcggacccggtggtgccc
tcgtcgcggcaccgggagatcgtgcgggcggcggcccggctgttcgacgagcgcggctac
caccacacctcgatggacgacatcgccgccgcggtgggcatcaagaagccgaccctctac
caccacgtgccgagcaagggccgcatcctcgcccggatccacgacgacctcgccgaccgg
ctgctggggcggctgcgcgagcgcatcgacaccggcgcggcgcccgccgcggtgctgctc
ggggtgctcgaggaccacctcgagctgctcgaccgcgagcccgccaacctgcgctgctac
tacgagcaccgccgggagctgccgcccgaggacgaggcccactcgcgggcgcgccgcgac
gagtacttcgccgcggtgctggccgtggtcgaggacggcgtggcccgcggggacttcgcc
gtgaccgacccgcggttggcgacgctggcgttcttcggcgtgtgcaactggtcgtaccag
tggtaccggccggggggtgcgatggcggcgcgggcgatcgccgtgagcttctggcgctgt
ttcctgtccggcatcgccgcgaccagcacggggcctgcgccgtag
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