Phytobacter diazotrophicus: HHA33_19110
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Entry
HHA33_19110 CDS
T06586
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pdz
Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdz03009
]
HHA33_19110
Ribosome biogenesis [BR:
pdz03009
]
Prokaryotic type
ribosomal protein modification factors
HHA33_19110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QJF18524
LinkDB
All DBs
Position
3998168..3999928
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AA seq
586 aa
AA seq
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MTQTYIPGKDAALEDSIARFQQKLLDLGFNIEEASWLNPVPNVWSVHIRDKDCALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFWLGDEVANGPFVHYPNEKWFPLTEDDTLPEG
ILDPRLRAFYDPENELTAGMLIDLQSGNEERGICALPFTRQSDEQTVYIPMNIVGNLYVS
NGMSAGNTRNEARVQGLSEVFERHIKNRIISERISLPEIPAEVLARYPGVVASIEKLEAE
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTPPTFDDEEVAEHTNLETHFIDSSGSISWDLFKQDADYPFADWSFAGTTEEEFATLM
AIFNAEDKEVYIADYEHLGVYACRILVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGS
EWEKEDYLNLIDQLDEEGHDDFTRVRELLGVATGKDNGWFTLRIGELKAMLALAGGDLDQ
ALSWTEWTIEFNGSVFSAERINYYRCLQTLLQLSQEEERQPLQYLNAFVRMYGADAVEAA
SAALSGEAPFYGLQAADGSLTAFPAHQSLLAAYEKLQRAKRAFWSN
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacctatatccccggcaaagacgccgcactggaagattccatcgctcgcttc
cagcaaaaactgctcgacctcggcttcaatattgaagaagcttcctggctaaacccggta
ccgaacgtctggtccgtgcacattcgcgataaagactgcgcgctgtgctttactaacggt
aaaggcgcaaccaaaaaggcggcactggcatctgcgctgggtgaatattttgagcgtctg
tccactaactatttctttgccgatttctggctgggtgatgaagtggctaatggcccattc
gtccattatccaaatgagaaatggttcccgctgaccgaagacgacacactgccggaaggc
attctcgatccgcgtctgcgcgcattttacgatccggaaaacgaactgacggcaggcatg
ctgatcgatctgcagtccggcaatgaagaacgcgggatttgcgccctgccctttacccgc
cagtcagatgaacaaaccgtctatattccgatgaatatcgtcggtaacctgtatgtctcc
aatggcatgtcagcgggcaatacccgtaatgaagctcgcgtccagggtttgtccgaggtt
ttcgaacgtcatattaaaaaccgtatcatcagcgaacgtatcagcctgcctgaaattcct
gccgaggttcttgcacgctatcctggcgttgtggcatctattgagaaactggaagccgaa
ggtttcccgatttttgcctatgatggctcgctgggcggtcaatatccggtgatttgcgtt
gtcctgtttaacccggctaacggcacctgctttgcctcattcggcgcacacccggatttt
ggcgtggcactcgaacgtaccgtgaccgaactgctgcagggccgcagcctgaaagatctg
gatgtctttaccccgccgacgtttgatgatgaagaagtcgcagagcataccaacctcgaa
acgcactttatcgactccagcggttcgatctcctgggatctgttcaagcaggatgcagac
tacccgtttgctgactggagctttgccggaacaaccgaagaagagtttgccacccttatg
gccatcttcaatgcagaagataaagaagtgtacatcgccgactacgagcatctgggcgtt
tacgcctgccgcatcctggttccgggcatgtcagatatttatccggcggaagatctctgg
ctggcaaacaacagcatgggcagccatctgcgtgaaacaatcctctctctgccaggcagc
gagtgggaaaaagaagactacctgaatcttatcgatcagcttgatgaagaaggtcatgac
gatttcacccgcgtccgggagctgctgggtgtggcgaccggtaaagacaatggctggttt
acgctgcgtattggcgaactgaaagcgatgctcgcgctggcgggtggcgaccttgatcag
gcgctctcgtggacggaatggacaattgaattcaacggttcggtctttagcgctgagcgc
atcaattattaccgctgcttgcaaacgctgttgcaactgtctcaggaagaagagcgtcag
ccgctgcaatatctgaatgcttttgtgcgcatgtacggtgcagatgcggttgaagcggcc
agcgcggcgctaagcggagaagcgcctttctatggtctgcaggcagcggatggttcactg
acggcgtttccggcgcatcagagcttgttagcggcttacgaaaaattacaacgggccaaa
cgtgccttttggtcgaattaa
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