KEGG   Pectobacterium parmentieri SCC3193: W5S_3918
Entry
W5S_3918          CDS       T02514                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
pec  Pectobacterium parmentieri SCC3193
Pathway
pec00470  D-Amino acid metabolism
pec00550  Peptidoglycan biosynthesis
pec01100  Metabolic pathways
pec01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pec00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    W5S_3918
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    W5S_3918
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    W5S_3918
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pec01011]
    W5S_3918
Enzymes [BR:pec01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     W5S_3918
Peptidoglycan biosynthesis and degradation proteins [BR:pec01011]
 Precursor biosynthesis
  Amino acid ligase
   W5S_3918
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 TTL ATPgrasp_ST ATP-grasp ATP-grasp_3 RimK ATPgrasp_YheCD GARS_A
Other DBs
NCBI-ProteinID: AFI91981
UniProt: A0A0H3IAE2
LinkDB
Position
complement(4228166..4229086)
AA seq 306 aa
MTEKVAVLLGGTSAEREVSLLSGQAVLAGLKEAGINAHAVDTRDFPVTKLKEDGFTRVFI
ALHGRGGEDGTLQGVLEFLELPYTGSGVMASALTMDKLRTKQVWQAVGLPVSPYVALDRR
HYSETAANELLAKFTHLGLPLIVKPSREGSSVGMSKVNALSELPAALEEAFRHDDDVLVE
KWLSGPEYTVAILGDEVLPSIRIQPAGTFYDYEAKYLSDDTQYFCPSGLPDDQEQALAVL
AMAAYRAVDCSGWGRVDFMLDSDGAFYLLEVNTSPGMTSHSLVPMAARQRGLTFSQLVVK
ILELAG
NT seq 921 nt   +upstreamnt  +downstreamnt
atgactgagaaagttgctgtattgcttggtggaacctctgctgaacgtgaagtgtcgtta
ctttccggtcaggcggttttggctggactgaaagaagcgggcatcaatgcacatgcggtc
gatacccgtgacttccccgtgacgaaattgaaggaagacggttttacccgcgtattcatc
gccttacatggtcgtggtggtgaagatggcacattgcagggcgtgctggaatttctggaa
ttaccctataccggcagcggcgtgatggcatccgcactgacgatggataagctccgtacc
aagcaggtgtggcaagcggtcggattaccagtatcgccttacgtggcattggatcgtcgc
cactattcggagacggcggcaaatgaattgctggcgaaattcacgcatctcggattgcca
ctgattgtcaaaccaagccgtgaaggttccagcgtcggcatgagcaaagtgaatgcgctt
agtgagttgcctgcggcactggaagaagcattccgtcatgatgacgatgttctggtcgag
aaatggctgagtggcccagagtataccgttgctattctgggggatgaggtattgccgtct
attcgcatccagcctgcggggacgttttacgactatgaagcgaagtatttgtcggacgat
acccagtatttctgtccaagtggcctgccggacgatcaagagcaggcgttagcggtactg
gcgatggcggcttatcgtgcggtggactgtagcggatggggacgcgtcgattttatgtta
gatagcgacggtgctttctacctgcttgaagtgaatacgtctccagggatgacgagtcac
agcctggttcctatggcggcgcgtcaacgtggtctgactttttcacaattggtcgtgaaa
attctggagcttgctggctga

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