Pectobacterium parmentieri SCC3193: W5S_3918
Help
Entry
W5S_3918 CDS
T02514
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00470
D-Amino acid metabolism
pec00550
Peptidoglycan biosynthesis
pec01100
Metabolic pathways
pec01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
W5S_3918
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
W5S_3918
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
W5S_3918
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pec01011
]
W5S_3918
Enzymes [BR:
pec01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
W5S_3918
Peptidoglycan biosynthesis and degradation proteins [BR:
pec01011
]
Precursor biosynthesis
Amino acid ligase
W5S_3918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
TTL
ATPgrasp_ST
ATP-grasp
ATP-grasp_3
RimK
ATPgrasp_YheCD
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AFI91981
UniProt:
A0A0H3IAE2
LinkDB
All DBs
Position
complement(4228166..4229086)
Genome browser
AA seq
306 aa
AA seq
DB search
MTEKVAVLLGGTSAEREVSLLSGQAVLAGLKEAGINAHAVDTRDFPVTKLKEDGFTRVFI
ALHGRGGEDGTLQGVLEFLELPYTGSGVMASALTMDKLRTKQVWQAVGLPVSPYVALDRR
HYSETAANELLAKFTHLGLPLIVKPSREGSSVGMSKVNALSELPAALEEAFRHDDDVLVE
KWLSGPEYTVAILGDEVLPSIRIQPAGTFYDYEAKYLSDDTQYFCPSGLPDDQEQALAVL
AMAAYRAVDCSGWGRVDFMLDSDGAFYLLEVNTSPGMTSHSLVPMAARQRGLTFSQLVVK
ILELAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaaagttgctgtattgcttggtggaacctctgctgaacgtgaagtgtcgtta
ctttccggtcaggcggttttggctggactgaaagaagcgggcatcaatgcacatgcggtc
gatacccgtgacttccccgtgacgaaattgaaggaagacggttttacccgcgtattcatc
gccttacatggtcgtggtggtgaagatggcacattgcagggcgtgctggaatttctggaa
ttaccctataccggcagcggcgtgatggcatccgcactgacgatggataagctccgtacc
aagcaggtgtggcaagcggtcggattaccagtatcgccttacgtggcattggatcgtcgc
cactattcggagacggcggcaaatgaattgctggcgaaattcacgcatctcggattgcca
ctgattgtcaaaccaagccgtgaaggttccagcgtcggcatgagcaaagtgaatgcgctt
agtgagttgcctgcggcactggaagaagcattccgtcatgatgacgatgttctggtcgag
aaatggctgagtggcccagagtataccgttgctattctgggggatgaggtattgccgtct
attcgcatccagcctgcggggacgttttacgactatgaagcgaagtatttgtcggacgat
acccagtatttctgtccaagtggcctgccggacgatcaagagcaggcgttagcggtactg
gcgatggcggcttatcgtgcggtggactgtagcggatggggacgcgtcgattttatgtta
gatagcgacggtgctttctacctgcttgaagtgaatacgtctccagggatgacgagtcac
agcctggttcctatggcggcgcgtcaacgtggtctgactttttcacaattggtcgtgaaa
attctggagcttgctggctga
DBGET
integrated database retrieval system