Pseudonocardia sp. EC080619-01: AD017_23605
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Entry
AD017_23605 CDS
T04234
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pecq
Pseudonocardia sp. EC080619-01
Pathway
pecq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pecq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AD017_23605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pecq03400
]
AD017_23605
Enzymes [BR:
pecq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AD017_23605
DNA repair and recombination proteins [BR:
pecq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AD017_23605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ALL84983
UniProt:
A0A0P0SKA9
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All DBs
Position
complement(5002839..5006204)
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AA seq
1121 aa
AA seq
DB search
MLELHRAERADTLVDALAAVLAEGSGDPFAAEFVAVPERGVERWLAQKLSHRLGAGSGSG
GVCANVRFPSPAQLLGEIVTHVAGVDAETDPWAPGRAVWPLLEIVDEAARSGDDRFTGLA
AHLDRGGHGRRYALARSLAGLFGSYATHRPGLLRGWRSGDDGVPADLGWQPELWRRLRAR
LDVPGPAERLDAAVAALRSGASPGDDVPQRLSLFGPTRLAAEHLAVLGALAEHRDVHLWL
PHPSPVMWDAVRAARPEAPPARTDDGSARLVANPLLRSLGRDVRELALRLPAAGAGVTDT
HHPAPAPTGPPTLLRRLQDGLRDDATPPAPDARPLLDPADRSVVLHSCHGPDRQVEVLRE
ALLGLLAGDDTLEPRDIVVMCPDIEVFAPLITASFGLAPDGSGTDGPGPSRDELHPGHLL
RVRLADRALRQANPLLGTVSTLLELAGSRLTASQVLDLVSTGPVRRRFRLDDDALERLSE
LVTAAGIRWGLDAAHRTPYRLDGVEQNTWRSGLDRLLVGVAMAETPGAPAWLGTALPLDE
IDSSDVDLVGRLAEIVDRLGTVVDGLRGPQPLSAWVAALEEGLAALTDTPPSEAWQATQA
RAELADVLHTAGPQSGTVDLDLPDVRGLLAERLRGRPSRANFRTGTLTVATLVPMRAVPH
RVVCLLGCDDGVFPRAGTPDGDDVLARDPVVGERDPRGEDRQLLLDAIGSATDHLVVVSS
GADERTGVERPPSVPIGELCDAIDATVTTGTGQHASEALRARHPLQPHDRRNFTAGSLLA
SGPFSFDRAALRGAEAADGPRAAVPLFPPDPLPEPDAEESVDLDDLVAFVEHPVRAYLRQ
RVRVLPPGENAEPDDALPVELDGLATWKIGDRLLADRLAGAPPQAVARAETLRGDLPPGG
IGHRVLTDVGGRVEPLVSLAAAVRTGEAASQDLVAPLGGTPLDGITVTGTVPGLHGDVVV
RVEYSRLKAKHRLRAWVQLLALTAAHPDRPWTAVTIGRGTGGAARSTLGPVPPDRARSVL
ADLVALRREGLREPLPLPTDAAAVYARNRSRGVVPPNALAAADSEWSRFERDDAAHVFVR
GSGAPLLTREEPGSGAEPTRFGSLAARLWAPLLDHERQDAP
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaactccaccgggccgagcgtgcggacaccctcgtcgacgcgctcgccgccgtg
ctcgcggagggttccggcgacccgttcgccgccgagttcgtcgccgtcccggagcgcggt
gtggagcgctggctggcccagaagctctcgcaccggctcggggccgggtccggctccggc
ggtgtctgcgccaacgtgcggttcccgtcgcccgcgcagctgctcggcgagatcgtcacg
cacgtcgccggggtcgacgcggagaccgacccgtgggcgcccggccgggcggtctggccg
ctgctggagatcgtcgacgaggccgcccggtccggtgacgaccgtttcaccggcctcgcc
gcccacctcgaccgcggcggtcacggccgccgctacgcgctcgcccgctcgctcgccggg
ctgttcggctcctacgcgacccaccggcccgggctgctgcgcggctggcgctcgggcgac
gacggggtgcccgccgacctcggctggcagccggagctgtggcggcgcctgcgggcccgg
ctcgacgtacccggccccgccgagcggctcgacgccgccgtcgccgcgctgcggtccggc
gcctcccccggcgacgatgtgccgcagcggctctcgctgttcgggccgacccggctcgcc
gccgagcacctcgccgtcctgggggcgctcgcggagcaccgcgacgtgcacctctggctg
ccgcacccctcccccgtcatgtgggacgcggtgcgcgcggcccgcccggaggccccgccg
gcccgcaccgacgacggcagcgcccggctggtcgcgaacccgctgctgcgctccctcggc
cgcgacgtccgtgagctggcgctgcggctgcccgccgcgggcgccggggtcaccgacacg
caccacccggcacccgcgcccacggggccgccgacactcctgcgccggttgcaggacggg
ctccgcgacgacgccacgcccccggcgcccgacgcgcggccgctgctcgacccggccgac
cgcagcgtcgtgctgcactcgtgccacggcccggaccggcaggtcgaggtcctgcgcgag
gcgctgctcgggctcctcgcgggcgacgacaccctcgagccgcgcgacatcgtggtgatg
tgcccggacatcgaagtgttcgcaccgctgatcaccgcgtcgttcgggctggcgcccgac
ggctccggcaccgacggcccgggcccctcccgcgacgagctgcaccccggtcacctgctc
cgggtccggctggcggaccgggcgctgcggcaggcgaacccgctgctcggcacggtgtcg
acgctgctggagctcgccgggtcccggctcaccgcctcccaggtgctcgacctcgtctcc
accggcccggtgcggcgccgcttccggctcgacgacgacgcgctggagcgcctgtccgag
ctggtcaccgccgccgggatccggtggggcctcgacgccgcgcaccgcaccccctaccgg
ctcgacggcgtcgagcagaacacctggcggtccgggctggaccggctgctcgtgggcgtc
gcgatggccgagacaccgggggcgccggcgtggctgggcaccgcgctgccgctcgacgag
atcgactcgtccgacgtggacctcgtgggcaggctcgccgagatcgtcgaccgtctgggc
accgtcgtcgacggtctgcgcgggccgcagccgctgtcggcgtgggtcgccgcgctggag
gagggcctcgccgccctgaccgacaccccgccgtcggaggcgtggcaggccacgcaggcc
cgcgccgagctcgccgacgtgctgcacacggccgggccccagtcgggcaccgtcgatctc
gacctgcccgacgtccgcggcctgctcgccgaacggctgcgcgggcggccgagccgggcg
aacttccgcaccggcacgctgacggtggccacgctggtgccgatgcgggcggtcccgcac
cgggtcgtctgcctgctgggctgcgacgacggtgtgttcccccgggccggcaccccggac
ggagacgacgtgctcgcccgcgatcccgtcgtcggcgagcgggacccgcgcggcgaggac
cggcagctgctgctcgacgcgatcggctcggcgaccgaccacctggtcgtcgtcagctcc
ggtgcggacgagcggaccggtgtggagcggccgccgtcggtgccgatcggggagctgtgc
gacgcgatcgacgccaccgtcaccaccggcaccgggcagcacgcgtcggaggcgctgcgt
gcccggcacccgctgcagccccacgaccggcgcaacttcaccgccgggtcgctcctcgcg
tccgggccgttcagcttcgaccgtgccgcgctccgcggcgcggaggccgcggacggaccg
cgggcagcggtgccgctgttcccgcccgatccgctgcccgagcccgacgccgaggagtcc
gtcgacctcgacgacctcgtcgccttcgtcgagcacccggtccgggcgtacctgcgccag
cgggtccgcgtgctgccgcccggggagaacgccgagcccgacgacgcgctgccggtcgag
ctcgacgggctcgccacctggaagatcggcgaccggctgctcgccgaccggctcgccgga
gccccgccgcaggccgtcgcccgggcggagacgctgcgcggcgacctgcccccgggcggc
atcgggcaccgcgtgctgaccgacgtcggcggccgggtggagccgctggtctccctcgcc
gccgccgtccggaccggcgaggcggcctcgcaggacctggtggcaccgctgggcggaacc
ccgctggacgggatcaccgtcaccggcaccgtgcccggtctgcacggcgacgtcgtggtg
cgggtcgagtactcgcggctgaaggccaagcaccggctgcgggcgtgggtgcagctgctc
gccctgaccgccgcgcacccggaccgaccgtggacggcggtgacgatcggccgcggcacc
ggcggcgccgcccgctccaccctcggaccggtgcccccggatcgagcccggtccgtgctc
gccgacctggtcgcgctgcggcgtgaggggctgcgcgagccgctgccgctgccgaccgac
gccgcggccgtctacgcccgcaaccgttcccgcggcgtggtcccgccgaacgcgctcgcc
gcggccgactccgagtggtcccggttcgagcgcgacgacgccgcgcacgtgttcgtccgc
ggctccggtgcaccgctgctcacccgcgaggagcccgggagcggcgccgagccgacccgc
ttcggttcgctcgccgcccggttgtgggcgccgctgctcgaccacgagaggcaggacgca
ccgtga
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