Phycodurus eques (leafy seadragon): 133416828
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Entry
133416828 CDS
T09682
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
133416828 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pee04040
]
133416828 (cngb1a)
Ion channels [BR:
pee04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133416828 (cngb1a)
BRITE hierarchy
Motif
Pfam:
cNMP_binding
Mem_trans
PAZ_4
Motif
Other DBs
NCBI-GeneID:
133416828
NCBI-ProteinID:
XP_061560061
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All DBs
Position
2:1143675..1165823
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AA seq
1124 aa
AA seq
DB search
MDFPQIRVDKKPESSSSIRIFCLKLEQPEVITVKVFIMMSWLLKIVPQPPRTTQLHEPNP
QTEQKVTIQDESKQEVALSSESRSRKGVVRWMSEGLDKVFPPLVVNENNRQAATEDAAVA
AGETPPLGPLHATFAAAHVPLEEVESEHRDAADEEPLPPGTAEAEKQSNIMGWIGSGLGR
LLPRPTQKQEADGDLHDTIQKKREAQLSEQEQQPAAKDGLETKHDKEVGDVSWIPLLENI
KKDAGEAVLAQVEKRLQQQRLEAARLAEDAARRAAQEAVRLLEAEHSATIVIQRLPEANE
QLPNILEEENEDELDRCLPEGGAQHSVGAQEVSALSERKDPASSAGQVETGAEVADEGLQ
LDAGKAVIIPEIFTPPGCAPMLSVVDPALSKLRVTANLSADDDDEEESVRGGLKSWSSQG
DLLTADVRPASAASVGSVVVQDRLGQLVRLFKGRTERQKDRLVDPDESEQESPATSPSKA
LPPPTPPEEDKLEPPTTGKEEEDDEPALHFQLLRQAVKILKLPSMPKWLRAIVEFRFPSS
IDPFTDLVYVVWLFLVVAAWNWNVWLIPIRWAFPYQTPENLHLWLLADYTCDLIYIVDIL
LFQPRLQFVSGGDIVVRDQRHKFTICLLVVLHCHRSVFLPHLTLSHNVLFQCDKKAMREN
YMTTERFKIDVISLFPMEILYYWTGVNSLLRFPRLLKYHVFFEFNDRMEAVMKKAYIYRV
IRTSTYLLYSLHINACLFYWGSDYEGLGSTKWVYDGKGNAYIRCYYFAVKTLITIGGLPD
PTTVFEICFQLINYFVGVFAFSIMIGQMRDVVGAATAGENYYRACMDSTTKYMNSYNIPN
PVQNRIKTWYDYTWKSQGMLDEQELLVQLPAKMRLDMAVDVNYSIVSKVALFQGCDRQMV
FDMLTRLKSVVYLPGDFVCKKGEIGREMYIIKQGEVQVVGGPDLKTVFVTIRAGSVFGEI
SLLAGGGGNRRTANVKAHGFANLFILDKKDLAEILVHYPESQKLLRKKAKTMLTKDKKPD
EKGGGKDVAQVIPVRPDTPKMFKAALRVTTQAGMAGTFAKLKKSYGQPQDQAPPSTRHHG
SAAPPTGSSLVVTVTSSKEGEELLSMEVDSGAEKKIQEDEVHTK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggattttccccaaatcagagttgataagaaaccggagtcgtcatcgagcatcagaatc
ttctgtttgaagctcgaacaacctgaagtcattacggtaaaagtcttcatcatgatgagc
tggctgctcaaaattgttcctcagccccccaggacaacccaactccacgaacccaacccc
caaacggagcagaaggtgacaatccaggatgagtccaaacaggaagtggcgttgtcatca
gagagcagaagcaggaagggcgtggtgcgttggatgagtgaaggtctggacaaggtgttt
ccaccgctcgtcgtcaacgagaacaaccgtcaggccgccacggaggatgctgcggtagca
gcaggtgagactccgcctttaggaccacttcacgccacctttgccgccgcgcatgtcccg
ctagaggaggtggagtccgagcatcgggacgccgcagacgaggagcccctcccgcccggg
acggccgaggcagagaagcagtccaatatcatgggatggatcggcagcggcctcgggcgc
ctgttgcctcggccgacgcaaaagcaggaagcagacggggaccttcacgacaccattcag
aagaagagggaggcgcaactgtcggagcaggaacagcagccggcagcaaaagacggcctc
gagacgaagcatgacaaggaggttggagatgtgagttggattccgctgctggagaacatc
aagaaggatgctggcgaggcggttctggctcaagtggagaaaagacttcagcagcagcgc
ctggaggccgcccgcctggcggaggacgcggctaggagggcggcacaggaagccgtccga
ctgctggaggcggaacattcagccacgatcgtcattcaacgtctgcccgaggccaacgag
caacttcctaacatcctggaggaggaaaacgaggacgagctcgacaggtgcctgcctgaa
ggtggcgctcaacactcagtcggagcacaagaagtcagcgccctttctgagaggaaagac
ccggcaagttccgccgggcaggttgaaactggagctgaagttgcagatgaaggtctgcaa
ctggacgcgggaaaagctgtgatcatccctgagattttcacgccaccaggctgcgccccc
atgctgagtgtcgtcgaccccgctctgtcaaaactcagagtgaccgccaatctctctgct
gacgacgacgacgaagaagagtcagtaaggggaggactcaagtcctggtccagtcaaggt
gacctgctgactgcagacgtccgtccggcatcggcggccagcgttggcagcgtggtggtt
caggaccgtctcggccagctggtccggctcttcaaaggacggactgaacgccaaaaagac
cgtctggttgacccagacgagtcggagcaggaaagtcccgctacctctcccagcaaagct
ctgccgcccccaaccccacccgaagaagacaagttggagccccccaccaccggaaaggaa
gaagaagacgatgagccagcattacactttcaacttctaagacaggctgttaaaattctc
aaacttcccagcatgcccaaatggctccgagccattgtggaattccggttcccctccagc
atcgacccgttcactgatttggtttacgtggtgtggctgttcttagtggtggcagcctgg
aactggaacgtttggctgatacccatacgctgggcctttccctaccagaccccagagaac
ctccacctgtggctcctggccgactacacctgcgacctcatctacatcgtggacatcctg
ctcttccaaccccgcttacaatttgtcagcgggggagacatcgtggtcagggaccaaaga
cacaaattcacaatttgtctgcttgtcgttttacattgtcatcgttctgtcttccttcct
catctcacgctatcccataacgttctgtttcagtgtgacaaaaaagccatgagagaaaac
tacatgaccacggagaggttcaagatagacgtcatcagtctttttcccatggagatcctc
tactactggacaggagtcaactctctgcttagattccctcgtctgcttaagtaccacgtt
ttcttcgagttcaatgacaggatggaggcggtgatgaagaaggcctacatctacagggtg
atccggacttccacctacctgctgtactctctgcacatcaacgcgtgcctcttctactgg
ggctccgactatgaaggcttagggtccaccaagtgggtgtacgacgggaaaggcaatgcg
tacatccgctgctactacttcgcagtgaagacattgatcaccattggcggacttccggac
ccgaccaccgtctttgagatctgcttccagctcatcaactattttgtcggagtcttcgct
ttctcgatcatgatcggacaaatgagggacgtggtgggggcagccacggcaggcgagaac
tactaccgggcctgcatggacagcactaccaagtacatgaactcttacaacattcccaac
cccgtccagaaccgcatcaagacctggtacgactacacgtggaagagccaaggcatgcta
gacgagcaggagttgctggtgcagcttcccgccaaaatgagactggacatggccgtggac
gtcaactactccatcgtcagcaaggtggcgctcttccagggttgtgatcgtcagatggtg
tttgacatgctgacaagactcaagtctgtggtctacctgccaggagactttgtgtgcaag
aagggtgagatcggcagagaaatgtacatcatcaagcagggcgaggtccaagtggttggc
gggccagacctgaagacagtttttgtcaccatcagagcaggttcagtgtttggagagatc
agtttgttggcggggggcggagggaaccgccgcaccgccaacgtgaaggcgcacggattc
gccaacctgttcatcctggataaaaaggacctggcagagatcctggtccactatccagag
tcccagaaacttctccgcaagaaggccaagaccatgctgaccaaggacaagaagccggac
gaaaagggaggcggcaaagacgtcgcccaggtcattccggtccggcctgacacgcccaaa
atgttcaaggcggcgctgagggtgacgacgcaggcgggaatggcaggaaccttcgccaaa
ctcaagaagagctacggccagcctcaggaccaggctccgccctcaactcgacatcacggc
tcggcggcgccgcccacaggcagctcattggttgtcaccgtgacgtcttcgaaggaaggg
gaggagcttctgtcgatggaagtggatagtggagcagagaagaagatacaggaggacgaa
gtgcacaccaagtaa
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