Planctopirus ephydatiae: Spb1_02370
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Entry
Spb1_02370 CDS
T06220
Symbol
rfbB_2
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh00053
Ascorbate and aldarate metabolism
peh00520
Amino sugar and nucleotide sugar metabolism
peh00541
O-Antigen nucleotide sugar biosynthesis
peh01100
Metabolic pathways
peh01240
Biosynthesis of cofactors
peh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
Spb1_02370 (rfbB_2)
00520 Amino sugar and nucleotide sugar metabolism
Spb1_02370 (rfbB_2)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Spb1_02370 (rfbB_2)
Enzymes [BR:
peh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
Spb1_02370 (rfbB_2)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QDV28374
UniProt:
A0A518GIF4
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Position
269107..270120
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AA seq
337 aa
AA seq
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MKYLVTGAAGFIGFHTTKKLIARGDTVVGLDNLNDYYQVSLKHDRLAQLKNLPGFAFEQI
ELADRPAMKALFERHQFDVVIHLAAQAGVRYSLTNPQAYIDSNLVGFCEILEGCRHSGVK
HLAYASSSSVYGGNTKMPFSIHDNVDHPVSLYAATKKANELMAHTYSHLFRLPTTGLRFF
TVYGPWGRPDMAMWIFTKAILEGRPIDVFNEGKMRRDFTFIDDIVEGVVRVADNIPVPNT
SWQSDHPDPATSSAPYRVYNIGNNRPEDLMEMIGILESCLGKKAEKRLLPMQPGDVPATY
ADVDDLVQDVGFKPATPLATGIQRFVDWYRSYHKIPA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatctcgtgaccggggccgctggctttattggctttcataccacaaagaaactc
atcgcccggggcgataccgtcgtcgggctcgacaacctcaacgattactaccaggtcagc
ctcaagcacgaccggctggcccagctcaaaaatctgccgggcttcgcattcgagcagatt
gaactggccgaccgaccagccatgaaagctctcttcgaacgccaccagttcgatgtggtc
atacatctggcagctcaagccggtgtccgctattcgctcaccaatcctcaagcgtacatc
gacagcaatctcgtcggcttctgcgagattctcgaaggctgtcggcattccggcgtgaaa
catctcgcctatgcgtcgtcatcctcggtttatggcggcaacaccaaaatgcccttctcg
attcacgacaacgtcgatcatcccgtcagcctctatgccgccaccaaaaaagccaacgag
ctgatggcacacacgtacagccacctcttccggctccccaccaccggcctccgattcttc
accgtctacggcccctggggaagacccgatatggccatgtggatttttaccaaggccatt
ctcgaaggtcgccccatcgatgtcttcaacgaagggaaaatgcggcgagacttcaccttc
attgacgatatcgtcgaaggggtcgtccgtgtcgccgacaacattccggttccaaacacc
agttggcagagcgatcatcccgatcccgccaccagttccgccccctatcgcgtttacaat
attggcaacaatcgccctgaagatctgatggaaatgattgggattctcgaatcctgcctc
gggaaaaaagccgaaaaacgactcctacccatgcagccgggcgatgtccccgccacctat
gccgatgtcgatgatctcgtccaagatgtcggtttcaaacccgcaactccactcgccaca
gggatccagcgattcgtcgactggtaccgctcctaccataaaattcctgcgtag
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