Planctopirus ephydatiae: Spb1_06470
Help
Entry
Spb1_06470 CDS
T06220
Name
(GenBank) Carbohydrate-selective porin, OprB family
KO
K07267
porin
Organism
peh
Planctopirus ephydatiae
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
peh02000
]
Spb1_06470
Transporters [BR:
peh02000
]
Other transporters
Pores ion channels [TC:
1
]
Spb1_06470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
QDV28782
UniProt:
A0A518GJK9
LinkDB
All DBs
Position
792310..793956
Genome browser
AA seq
548 aa
AA seq
DB search
MPYGRDMKPSLARFDFPHRSIQDERSNVPSNSLCALAGHEMDGALKSLQLLTGQGGHGMA
TKSWRSWAHVGWSLGSVLLASSMAAEGLAEESLFTDSWFLRGSAMSRPVEVDSPLSSESF
APSVIETDNYQLASFSSADSFSIDPVSAALSADSWRDRTQLTGNWGGYRDALAESGVTIE
ASSTNIYQGVASGGNNNEFAFGGRGDLFLKVDGGKAGLQEGLLITLHGEMNYGDAVNRAT
GAIIPINFAQVFPLPDAPTVALSNVSVTQLLSESMMVYLGKINTLDGFIRPYRGNAHGTD
GFMNGAFLFPTVMGRAIPYSTYGGGVVFLREMQPILSINVFDTNSTPTTSGFDEFFNNGA
SLYIEGRIPTSFFGMEGLHSLSGAYSSGTYRSTDPGLNFIIERIRGLNVPAPLETGSWAF
EYSFSQALWVDATDSKRSWGLFGSLGIADGNPNPIRWGSDIGIGGSSPLVSRPNDKFGVG
YYYLGVSSELRQIGPIRTALRDEHGVELFYNYQVTPTFQLTPDLQIITPGISTFDTSVNV
ALRANLIF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
ttgccttacgggcgcgacatgaagccgagtttggcacggttcgattttccacacagatcg
atacaagacgagcgatccaatgtgccgtcgaattctctttgtgccctggcggggcatgaa
atggatggtgcattgaagagcttacagttgttgaccgggcagggaggccatggaatggcg
acgaagtcgtggcgaagttgggctcatgttggctggagtctggggtccgtgctcctcgct
tcttctatggctgccgaaggtctggcggaagagtcgctgtttaccgacagctggtttctg
cgcgggtccgcgatgtcacgacctgtcgaagtcgattcaccgctcagtagtgagtcgttc
gctccgtcggttattgaaacggacaactatcaactggcttcattttccagtgcagacagt
ttttcgattgatcctgtctcggcagcactcagtgctgattcgtggcgtgatcgcacacag
ttgaccggcaactggggtggctatcgcgatgcactggccgagagcggcgtgaccatcgag
gcctcatcgacgaacatctatcaaggggtcgcctcaggcggcaacaacaatgaatttgcc
ttcggaggtcgtggtgatctgtttctgaaagtcgatggcgggaaagcgggtctgcaggaa
ggtttactcattacgttacatggtgagatgaactatggcgatgcggtcaaccgtgcgaca
ggcgccatcattccgatcaacttcgcacaagtgttcccgctgcctgatgccccgactgtg
gccctctcgaacgtgagcgtgacacagctcctctcagaatcgatgatggtctatctgggg
aagatcaacacactcgatggcttcatccggccttaccgtgggaatgctcatgggactgac
ggctttatgaacggtgcgtttctctttccgaccgtgatgggacgagcgattccttactca
acctacggtggcggtgtcgtctttttgagggaaatgcagccgatcctgtcgatcaatgtg
ttcgataccaacagcactcccaccaccagtgggtttgatgagttctttaacaatggcgca
tcgctttatatcgagggtcgaatcccgaccagcttttttggcatggaagggctgcactca
ctctcaggggcttacagcagtggaacctatcgttcgacagatcctggcttgaacttcatc
atcgaaagaattcgcgggctgaatgttcccgcacccctggaaacgggttcgtgggcgttt
gagtattccttcagccaggccttgtgggtggatgccacagactccaagcgaagctggggc
ctgtttggcagcctggggattgccgatggcaatccgaatcccatccgctggggatcggat
atcggcattggtggctccagccccttggtttcacgcccgaatgacaagttcggcgtggga
tattactacctgggtgtgagcagtgaactgaggcagattgggcccattcgcacagcattg
cgcgatgagcatggcgtcgaactcttctacaactatcaggtgacacccacattccagctg
acgccagatctgcagatcattacgcccgggatttcgacgttcgacacctcggtgaacgtc
gccttgcgggcgaatctgatcttttga
DBGET
integrated database retrieval system
