Planctopirus ephydatiae: Spb1_23370
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Entry
Spb1_23370 CDS
T06220
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh00521
Streptomycin biosynthesis
peh00523
Polyketide sugar unit biosynthesis
peh00541
O-Antigen nucleotide sugar biosynthesis
peh01100
Metabolic pathways
peh01110
Biosynthesis of secondary metabolites
peh01250
Biosynthesis of nucleotide sugars
Module
peh_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Spb1_23370 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Spb1_23370 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Spb1_23370 (rmlC)
Enzymes [BR:
peh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Spb1_23370 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QDV30404
UniProt:
A0A518GPE2
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All DBs
Position
complement(2888304..2888849)
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AA seq
181 aa
AA seq
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MIVTPDDTLPDVLKIEPRVFGDSRGFFFEVFQQERYSTSGLSQAFVQDNVSRSSRGTLRG
LHFQLVRPQAKLIQVIRGEIFDVAVDVRKSSPTFGHWMGCRLSDVNHHQLYVPAGFAHGF
CVISETADVLYKCTDYYFPQHERCLLWNDPAVGIAWPLEDFPILSAKDQQGQTLANLESF
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgacaccggatgacacacttcccgatgtcctgaagattgagccgcgagttttt
ggtgattcccgaggattcttcttcgaagttttccagcaggaacgctactcaacaagtggc
ttatcacaagcttttgttcaggataatgtgtcccgttcgtcgcgagggacactgcgtgga
ttgcattttcaactcgtgcgtccacaggccaaactcattcaggtgattcgtggagagatt
tttgacgtcgccgtcgatgtccgcaagagttcacccacattcggccattggatgggctgt
cgactgagtgacgtcaaccatcaccaactctatgttcctgcgggttttgcacacggattt
tgcgtcatctctgaaactgccgatgtgctctacaagtgcactgactattactttccacag
cacgaacgctgtctcctgtggaatgatccggctgtaggcattgcctggcctctggaagac
tttcccattctctcagccaaagaccagcaaggccaaaccctcgccaatctggaatccttc
gactga
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