Planctopirus ephydatiae: Spb1_26540
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Entry
Spb1_26540 CDS
T06220
Symbol
degP_3
Name
(GenBank) Periplasmic serine endoprotease DegP precursor
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh01503
Cationic antimicrobial peptide (CAMP) resistance
peh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Spb1_26540 (degP_3)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Spb1_26540 (degP_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
peh01002
]
Spb1_26540 (degP_3)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
peh03110
]
Spb1_26540 (degP_3)
Enzymes [BR:
peh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
Spb1_26540 (degP_3)
Peptidases and inhibitors [BR:
peh01002
]
Serine peptidases
Family S1: chymotrypsin family
Spb1_26540 (degP_3)
Chaperones and folding catalysts [BR:
peh03110
]
Other chaperones and cochaperones
DegP / HtrA
Spb1_26540 (degP_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
Trypsin
PDZ_6
PDZ_2
Peptidase_S46
PDZ
DUF460
Motif
Other DBs
NCBI-ProteinID:
QDV30720
UniProt:
A0A518GQ33
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All DBs
Position
3322868..3324766
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AA seq
632 aa
AA seq
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MMQCAIRFDSYRSFIVVIGLTILAFPQLATRAFANQIVVGNTPLSKDTQDAGQSQTEKIP
GIVKEAEQKRIQMIREVSPAVVAIFSSSGDGGGSGVLISPDGFALSNFHVTSGAGNFMKC
GLNDGKLYDAVIVGIDPTGDVALIQLQGRQDFPFARMGNSDLLKPGDAVFAMGNPFLLAT
DFTPTITAGIVSGLHRYQYPAGTFLEYADCIQTDASINPGNSGGPLFNLQGELIGINGRG
SFEKRGRVNSGAGYAISINQIRYFLGHLKSGRIVDHATLGATVRSGSSREVLVDQVLEGS
SAWNAGLREGDEIVTFAGRPMGSVNQFKNVLGIFPKGWSLPMVYRRDGQKQEILVELAAL
HTDTELMEFASGGAVRPAEKPGQPKPGQPKPGEKPTPQESPPEGHSEKPAEKLSPELKKL
FQSKAGFTNYHFNQREQKRLIAHLASLSGWRGATGLWKFAGDDAKGTSLSLILSPDGAGM
QWGETPFLQPAAGANWIDEPPSSGGFLAAMLHWKWLLTEGPEAFSEVYYLGTQPLDGQFG
DALNTPLYDALVLSKTGATMTVFFREDGVIAGFDFKASRDQPTCNVRFSSWGTLGAQPFP
QVLKVSSSGRSFGEFTLKTFEQKSSNSSEATR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagtgcgcaattcgattcgatagttatcgttcgttcatagtggtcatcggtctg
acgatcctggcttttccacagcttgctaccagagcctttgcgaatcagatcgtcgtcggg
aacacacccctttcgaaggatactcaggatgccgggcagtcccagacggagaaaattccc
ggtatcgtgaaagaagccgagcagaagcggattcaaatgatccgcgaagtctcccccgca
gtggtcgccatcttctcgagttcaggagatggaggtggatctggtgttttgatctccccc
gatggatttgcattgtcaaatttccacgtgaccagtggtgccggcaacttcatgaagtgc
ggactcaacgacggaaagctttacgatgcagtcatcgtagggatcgacccgacaggcgat
gtcgcactcattcaactgcaaggacgccaggattttccctttgcccggatgggaaacagt
gatctgctgaaacctggcgatgccgttttcgcaatggggaatccgtttcttctggccacg
gatttcactcccacaattacggccgggattgtgagcggcctgcatcgatatcagtatcct
gccggaacatttttggagtacgccgactgtattcagaccgatgcttccatcaaccccggc
aactctggggggccactgttcaatctgcagggtgaactgatcgggattaatggacgggga
tcattcgagaagcgtgggcgtgtgaattcaggggccggatatgcgatttcgatcaatcag
atccggtactttctgggccacttaaagtcgggacgaattgtcgatcacgccactttgggt
gccacagtgcgctcgggatcatcacgagaagtccttgtcgatcaggtgctggaaggttcg
agtgcctggaacgccggtcttcgagaaggtgatgaaattgtcacctttgcgggacgcccg
atgggaagtgtcaaccagttcaaaaatgtgctggggatttttcctaaaggttggtcactc
cctatggtctatcgccgggatggccagaagcaggagattctggtcgaactggccgctttg
cataccgataccgaactgatggaatttgcctcaggcggtgcagttcgtcccgcagaaaaa
cctggtcagcccaaacccggtcaacccaaaccaggagaaaagccgactcctcaagagtct
cccccggaaggacactcagagaagcccgcggaaaagctttctccagagctgaaaaaactc
ttccaatcaaaagccggatttaccaactatcacttcaatcaacgggagcagaaacgtctc
atagcgcatttggcgagcctctctggttggcggggtgccaccggactgtggaagttcgcc
ggggacgacgccaaaggtaccagtctttcactcattctttcgcccgatggagctggcatg
cagtggggtgaaactccgtttcttcagccagctgcaggagccaactggattgatgaacca
ccatcgagcggaggatttcttgcggccatgctgcattggaaatggcttctgaccgaaggc
ccggaggcattttctgaagtctactatctcggtacacaacccctggatggccagtttgga
gatgctcttaacactccactttacgatgcacttgtcctctccaagaccggggccaccatg
acggtcttctttcgtgaggatggagtgattgccggctttgattttaaagcttcccgtgat
cagccaacctgcaacgtcagattttcctcatgggggacactcggcgcccaaccctttccg
caagtgctcaaagtctcatcttcaggtcgttctttcggtgaattcacgctgaaaaccttc
gagcagaaatcttccaattccagcgaggcaactcgatga
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