Pedobacter aquae: FYC62_15920
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Entry
FYC62_15920 CDS
T06312
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pej
Pedobacter aquae
Pathway
pej00521
Streptomycin biosynthesis
pej00523
Polyketide sugar unit biosynthesis
pej00541
O-Antigen nucleotide sugar biosynthesis
pej01100
Metabolic pathways
pej01110
Biosynthesis of secondary metabolites
pej01250
Biosynthesis of nucleotide sugars
Module
pej_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pej00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FYC62_15920 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FYC62_15920 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FYC62_15920 (rfbC)
Enzymes [BR:
pej01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FYC62_15920 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QEK52992
UniProt:
A0A5C0VM47
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All DBs
Position
complement(3596804..3597355)
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AA seq
183 aa
AA seq
DB search
MNFIETPIKDLLVIEPKVWKDERGYFFESFNQKTFAQAGINLEFVQDNQSFSQKGTLRGL
HAQANPFAQGKLVRVIQGKVLDVAVDIRKNSPTYGQYHAIELSADNFKMFWVPPGFLHGF
VTLEDQTIFAYKVTGFYDKDSEIGVMWNDPDLNIDWKIKPEEAILSEKDQQLQNFRDLKA
FFD
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaactttatagaaacacccatcaaagatttattagttatagaacctaaagtttggaaa
gacgaaagaggttactttttcgaaagttttaaccagaaaacattcgcccaggccggcatt
aacttagaatttgtacaagacaaccaatctttttcccaaaaaggcactttaagaggttta
catgctcaagccaatccttttgcacaaggtaaattggtaagggttatacaaggtaaagtg
ttagatgtagcggtagatatcagaaaaaactcgccaacctacggccaataccatgctata
gagctaagtgccgataattttaaaatgttttgggtaccaccaggctttttacacggtttt
gtaaccctagaagaccaaaccatatttgcttataaagtaaccggcttttacgataaagac
tcagaaattggtgtcatgtggaacgatccagacttaaacatcgattggaaaattaaaccc
gaagaagccatcttatcagaaaaagaccaacaacttcagaatttcagagatttgaaagcg
ttttttgattaa
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