Candidatus Pelagibacter sp. IMCC9063: SAR11G3_00103
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Entry
SAR11G3_00103 CDS
T01465
Name
(GenBank) UDP-N-acetylglucosamine 4,6-dehydratase
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:
4.2.1.115
5.1.3.-]
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Pathway
pel00520
Amino sugar and nucleotide sugar metabolism
pel00541
O-Antigen nucleotide sugar biosynthesis
pel01100
Metabolic pathways
pel01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
SAR11G3_00103
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SAR11G3_00103
Enzymes [BR:
pel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
SAR11G3_00103
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
3Beta_HSD
GDP_Man_Dehyd
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
adh_short
KR
Sacchrp_dh_NADP
Semialdhyde_dh
NmrA
NolX
Shikimate_DH
DUF5300
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
AEA80578
UniProt:
F2I2Q8
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All DBs
Position
complement(79693..80721)
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AA seq
342 aa
AA seq
DB search
MKNKKNLSILDKRSILITGGTGSFGKAFVNFLLNKTKVKKIIIYSRDEYKQEIMSKELHT
SRERLRFFLGDVRDQKRLCVAMRDVDFVVHAAALKQVVAAEYNPQECIKTNINGAENVIF
ASMEMKVKKVIALSTDKAVNPINLYGATKLTSDKLFVAANNLSGKQKIAFSIVRYGNVVG
SRGSVVQLYKEMISLGKKELPVTDAKMTRFWISLDEAVKFVMFSLEDSKGGEIYVPKIPA
IKVVDVAKAFKNNIKIKIIGIRPGEKLHESLISLQDSLSTVEFKNYFSITPTIKFPHTKA
KLFIKNCKGETGTHNKKIFEYSSENSKYHYTISKISKFLKNF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaaaaaaatctttcaattttagataaacgctcaatattaattaccggagga
acaggttcgtttggaaaagcttttgttaattttttgttaaataaaaccaaagttaaaaaa
attattatctactctagagatgaatataaacaagaaataatgagtaaagagctacatacc
tctcgagaaagactgagatttttcttaggtgatgttagagatcaaaaacgactgtgtgta
gctatgagagatgtggattttgtagttcacgctgctgcacttaaacaagttgtggcagca
gaatacaatcctcaggaatgtataaaaactaacatcaatggagcagaaaatgttattttt
gcatccatggaaatgaaggttaaaaaagtaattgcactatcgacagacaaggccgtcaat
ccaattaatctatatggagcaacaaaattaacttcagataaactttttgtggcagctaat
aacttatctggaaaacaaaaaattgcattttcaatagttagatatgggaatgtggttggt
tctagaggttctgttgtccagctttataaagaaatgattagtttaggaaaaaaagaatta
ccagtaacagacgcgaagatgactagattttggataagtttagatgaggcggtcaagttt
gtgatgttctccctagaagattctaaaggaggagaaatatacgtacccaagattcctgca
attaaagtagtagatgttgccaaagcctttaagaataatataaaaataaagattatagga
atcagacctggagagaagttgcatgagtcactcatttcattgcaagattcattaagtact
gtcgaatttaaaaattatttctctataactccaacaataaaatttccacacaccaaagca
aaactctttattaaaaattgcaaaggagaaacaggaacgcacaacaaaaaaatatttgag
tattcttcagaaaattccaaatatcactatactatttctaaaataagcaaattcttaaaa
aatttttaa
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