Pelagibacterium flavum: OF122_01560
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Entry
OF122_01560 CDS
T08676
Name
(GenBank) ligase-associated DNA damage response exonuclease
KO
K07577
putative mRNA 3-end processing factor
Organism
pem
Pelagibacterium flavum
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99974 Translation
OF122_01560
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Motif
Pfam:
Lactamase_B_2
Lactamase_B_6
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
UYQ72505
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Position
complement(306565..307560)
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AA seq
331 aa
AA seq
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MIQAIDRNLHIRRINTYVDPTLPRERAIITHGHADHARSGHHKVLATPDTIAIMQTRYGK
DCAGSFQPLQFGQPLEIDDVTITLYPAGHILGSAQVLIEQDGQRVVVTGDYKRLPDKTAQ
PFELVPCDLLITEATFGLPVFQHPHPSEEIARLFKSLAAYPERAHVIGAYALGKAQRVIA
LLRDGGYDAPIYLHGAMQRLCDLYSERGIALGELRYATDATKDELAGAIVIAPPSALKDR
WSRRLPDPVLAMASGWMSVKQRARQRGIELPLVISDHVDWPELTQTVTETGARTIWVTHG
REDALVYWCRQQGLVAEPLNIQGYEDEGEDQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgatccaagcgatcgatcgcaatctccatatccggcgtatcaacacctatgtcgatcca
accctcccccgcgagcgcgccatcatcacccacggccatgccgatcatgcccgttcgggg
caccacaaggttctcgccacccccgataccatcgccatcatgcagacccgctacggcaag
gattgcgccgggagcttccagcccctccaattcggccagcccctcgaaatcgatgacgtc
accatcacgctctatcctgccggccacattctggggtcggcccaggtgctgatcgaacag
gacggccagcgggtcgtggtcaccggcgactacaagcgcctccccgacaagaccgcccag
cccttcgaactggtcccttgcgacctcctgattaccgaagccaccttcgggctgccggtc
ttccagcacccgcacccatccgaggaaatcgctaggcttttcaaatcgctcgccgcttat
cccgagcgcgcccacgtgatcggtgcctacgctctgggtaaggcgcaacgggtcatcgcc
ctgttgcgcgatggcggctatgatgccccgatctatctgcacggcgccatgcagcgcctg
tgcgatctctatagcgaacggggcatcgcgctcggcgaactccgctacgccaccgatgca
acaaaagacgagctggccggcgccatcgtcatcgccccgccctccgcgctcaaggatcgc
tggagccgtcgactgcccgatcccgtcctcgccatggcctcgggatggatgagcgtcaag
cagcgcgcccgccagcgcggcatcgagttgcccctggtcatttccgatcacgtcgactgg
cccgaattgacccagacggtcactgagactggggcccggaccatctgggtcacccacggc
cgcgaggatgcgctggtctattggtgccgccagcaagggcttgtcgccgaaccgctcaac
attcagggctatgaagacgagggggaagaccaatga
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