Pelagibacterium flavum: OF122_02090
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Entry
OF122_02090 CDS
T08676
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00521
Streptomycin biosynthesis
pem00523
Polyketide sugar unit biosynthesis
pem00541
O-Antigen nucleotide sugar biosynthesis
pem01100
Metabolic pathways
pem01110
Biosynthesis of secondary metabolites
pem01250
Biosynthesis of nucleotide sugars
Module
pem_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
OF122_02090 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OF122_02090 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OF122_02090 (rfbC)
Enzymes [BR:
pem01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
OF122_02090 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF1106
Motif
Other DBs
NCBI-ProteinID:
UYQ72599
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Position
complement(415913..416482)
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AA seq
189 aa
AA seq
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MNLRVERTPIEGLLILLPRRFSDERGFFSESWNRRALYDAGVDLPEFVQDNHSFSLVSNT
LRGLHFQSPPHAQGKLVRCGRGSLFDVAVDVRKGSATYGKWFGTDLSFENARQLWIPAGF
LHGFVTRENDTEIIYKCTDHFVPECEGVVHWDSAGIDWGLNSPPVLSQKDALAGPLSMFE
SPFEVGSAG
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttgagagtcgagcgaacaccgattgaaggactattgatacttctaccgcgccga
ttctctgatgaacgaggcttcttcagtgagagttggaaccgccgtgcactatatgacgca
ggcgttgatttacctgaatttgtccaagacaatcattcgttctccttggtttcaaataca
ttgcgcgggttacacttccagtctccgccgcatgctcaaggtaagttggtacgttgcggc
cgcggtagcctgtttgacgtggcggttgacgtgaggaaaggaagcgcaacctatggcaag
tggtttggaacggacctgagcttcgagaatgctcgccaattgtggattccggctggcttt
ctccacggtttcgtcactcgggagaacgacaccgaaatcatatacaaatgtaccgaccat
tttgtcccagaatgcgagggtgtcgtgcattgggatagcgccgggatagactggggctta
aattcgccccctgtcctgtcgcaaaaggatgcgttagcggggccgctgtcgatgttcgaa
agtccgttcgaagtaggtagtgccggatga
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