Pelagibacterium flavum: OF122_10020
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Entry
OF122_10020 CDS
T08676
Symbol
tyrS
Name
(GenBank) tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OF122_10020 (tyrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pem01007
]
OF122_10020 (tyrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pem03016
]
OF122_10020 (tyrS)
03029 Mitochondrial biogenesis [BR:
pem03029
]
OF122_10020 (tyrS)
Enzymes [BR:
pem01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
OF122_10020 (tyrS)
Amino acid related enzymes [BR:
pem01007
]
Aminoacyl-tRNA synthetase
Class I (A)
OF122_10020 (tyrS)
Transfer RNA biogenesis [BR:
pem03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
OF122_10020 (tyrS)
Prokaryotic type
OF122_10020 (tyrS)
Mitochondrial biogenesis [BR:
pem03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
OF122_10020 (tyrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
Acetyltransf_6
Motif
Other DBs
NCBI-ProteinID:
UYQ70425
LinkDB
All DBs
Position
complement(2004558..2005811)
Genome browser
AA seq
417 aa
AA seq
DB search
MTQFKSEFLNTLSERGFIHQVSDPDGLDKKFSTEIVTGYIGYDPTAASLHVGHLMQIMML
HWMQKTGHRPIALMGGGTGMIGDPSFKDEARKLLTVEGIAANIEGIKQKFANFLDFGQGP
QDAVMANNADWLLELGYIEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ
AYDFVELNKRYGCTLQMGGSDQWGNIVNGLDLGHRMLDTQFYALTSPLLTTASGQKMGKT
ANGAVWLNADALSVYDFWQYWRNTEDADVERFLKLFTTLPLDEIARVMAGVATDINEAKK
VLATEVTALVHGRQAAQDAAATAVAVFEAGQLDLSLPTIQIGWSALRGGLGILAATVTAG
LASSNGEARRHIQGGALKVNDQTVTDEKMSLGQDQVLSEGVIKLSIGKKRHVLLKPV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgacccagttcaaatccgaatttctcaatacgctctcagagcgcggtttcattcatcag
gtgtccgaccccgacgggctcgacaagaagttctcgaccgagatcgtgaccggctacatc
ggctacgatcccacggccgcatcgcttcacgtcggccacctgatgcagatcatgatgctg
cactggatgcagaaaaccggccatcgcccgatcgctctgatgggcggcggaaccggcatg
atcggagatccctccttcaaggacgaggcccgcaagcttctgaccgtcgagggcattgcc
gcaaacatcgagggtatcaaacagaagttcgccaattttctcgattttggccagggcccg
caagacgccgtaatggccaacaacgccgattggctgctcgaactcggctacatcgagttc
ctgcgagacgtgggccgccatttctcggtcaatcgcatgctcagctttgactcggtcaag
ctgcgtctggaccgcgagcagtccctgagctttctcgaattcaactacatgatcctgcag
gcctacgatttcgtggagctcaacaagcgctacggctgcaccttgcagatgggcggctcg
gatcaatggggcaatatcgtcaacggtctcgatctcggacaccgcatgctcgatacccag
ttctacgccctcacctcgccgctgctgaccacggcctcgggccagaaaatgggcaagacc
gccaatggtgctgtctggctcaatgccgatgcactttcggtttacgatttctggcagtac
tggcgcaacacggaggacgccgacgtcgagcgtttcctcaagctcttcacgaccttgccg
ctcgacgagatcgcccgcgtcatggccggtgtcgccaccgacatcaacgaagccaagaag
gtgctggcgaccgaggtaacggcgcttgttcatggccgccaggctgcccaggacgcggcc
gcaacggcagtggcggtctttgaagccggtcagctcgatctctcgctgccgaccatccag
atcggctggtcggccctgcgcggcggtcttggcatccttgcagcgactgtgaccgccggt
ctggcgtcatcgaatggcgaggcccgtcgccacatccagggcggtgcgctcaaggtcaac
gaccagaccgtgaccgacgaaaaaatgagcctgggccaggatcaggtcctcagcgagggc
gtcatcaagctctcgatcggcaagaagcgccacgtactgctcaagcctgtctga
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