Phalaenopsis equestris: 110018434
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Entry
110018434 CDS
T05601
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
peq
Phalaenopsis equestris
Pathway
peq03082
ATP-dependent chromatin remodeling
peq03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110018434
03083 Polycomb repressive complex
110018434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
peq03036
]
110018434
Enzymes [BR:
peq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110018434
Chromosome and associated proteins [BR:
peq03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
110018434
HDAC complexes
Sin3A-HDAC complex
110018434
BRAF-HDAC complex
110018434
REST complex
110018434
SHIP complex
110018434
MiDAC complex
110018434
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
110018434
Heterochromatin formation proteins
Other heterochromatin formation proteins
110018434
Chromatin remodeling factors
NuRD complex
110018434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
110018434
NCBI-ProteinID:
XP_020571404
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MPSKDRVAYFYDGNVGNVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAFPVEL
AQFHTPDYVDFLRRITPNTQHLFANELTLYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDVKEVGEREGKHYAINVPLKDGIDDASFTRLFNT
IIAKVVETYRPGVIILQCGADSLAGDRLGCFNLSIEGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETSVLLDTELPKEIPVNEYINYFAPDYSLKLQSRNMENLNSKTYLSSIK
VQVLENLRYIQSAPGVQMQEVPPDFYIPDFDDDEQNPDERSTLRTSKFSGMMSITRVIMT
TIKSAEHLVIFFFFFIFQNCLIFGMVEI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccaaggatcgagtggcgtatttctatgacgggaatgtgggcaatgtttatttt
ggaccaaaccatccaatgaagccacatcgtctctgtatgacacatcatcttgttctctca
tatgaacttcacaagaaaatggaaatatatagaccacacaaggcatttcctgtcgagctt
gcccagttccatacaccagattatgtggatttcttacgccgaattacaccaaacacgcag
catttgtttgcaaatgaattgacactgtataaccttggtgaagattgccctgtatttgag
aacctgtttgagttctgtcaaatatatgctggtggaacgatagatgctgcacgaagattg
aacaatcaactttgtgatatagctatcaattgggctggcggtttacatcatgcaaaaaag
tgcgaggcatcaggattttgctatataaatgacttggttttgggtatcttggagcttctg
aaatatcatgcccgtgttttatacatcgacatagatgttcaccatggagatggagttgaa
gaggctttctactttactgatagggtgatgactgttagcttccacaagtatggagatatg
ttctttcccggaactggcgatgtcaaggaagtaggtgaacgtgaaggcaagcactatgcc
attaatgtcccacttaaggatggaattgacgatgctagttttacaagactttttaatacg
atcattgccaaggttgttgaaacatatcgaccaggtgttattattctccaatgtggtgca
gactctctggctggagatcgcttgggctgcttcaacctttccattgaaggtcatgctgag
tgtgtgagatttgtgaagaaatttaatttgcctttgttggtgactggtggtgggggttat
acaaaagaaaacgttgcccgctgctggaccgttgaaactagtgttcttttagatactgaa
cttccaaaagagattccggtcaatgaatatatcaattattttgctccagattattctttg
aagcttcagagcaggaatatggagaacctgaatagcaaaacgtatcttagctccatcaag
gtgcaggttctggaaaatctccgctacatacaatctgctccaggtgttcaaatgcaagag
gttcctccagacttctatatccctgattttgacgatgatgagcagaacccagatgaacgt
agcacgctcaggacaagcaaattcagcgggatgatgagtattacgcgggtgataatgaca
acgatcaagagcgctgagcatctagtgattttttttttttttttcatttttcaaaattgc
ttaatttttgggatggttgaaatatga
DBGET
integrated database retrieval system