Phalaenopsis equestris: 110019939
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Entry
110019939 CDS
T05601
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
peq
Phalaenopsis equestris
Pathway
peq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110019939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110019939
03036 Chromosome and associated proteins [BR:
peq03036
]
110019939
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110019939
Chromosome and associated proteins [BR:
peq03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110019939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
110019939
NCBI-ProteinID:
XP_020573488
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MFGSTNPFGQSSSSPFGSPSVFGQTNSAANNPFAPKPFGSPNPFSSQTGLSAFGVSTGVF
GQPSSPAFGASSSPAFGSSMPSFGASSIPAFGSSYSSFGGSSVFGQKPAFGGFGSTSSQA
SPFGGSFQQTQPAFGSNMFGSSSPFGASSQPAFGATSTPAFGSTSSPAFGAASTPAFGAS
STPAFGATNTPAFGSNTAPAFGSTSTPLFGNTGMAFGASNTPAFGAPSTSLFGSASTPAF
GGSTTPAFGSSSSPAFGSTSASSFSFGSAPSSFGQSTPAFGISPFGSTPSPFGTQSSPFG
AQTSTPTFGSPGFGQSTFGSQAGGSRIAPYTATYEPNATGTQPAGKLESISAMPIYKDKS
HEELRWEDYQRGDKGGPNPAGQSSGISFPTSTQSNPFSQTSAFGQTSPFGQSSVFGQTSA
FGQAAANPFSSTISSNPFAPKTPAFGSTGFGSSSASLFSSPFSSSSTSPFGSTSSTPSLF
GAPSSGFGSSSSSSIFGSGSAPAFGSSPSIFGSSMVGSTSSFGSGLTFGNTQSSALFSST
ASLGQTPSPFGQSTGFQQSAPAFGSSLFNTPSTGFGGSLFSSSTPSLSNPAGFGQLTPSF
STPFQQSAPAQASSNFSFGNLGQAQIAPSGGFGSFPSSFNQGTFGQSPAIQANIVMQPTS
ITNPFGTLPVMPQMSIGRVGSSAPSVQYGISSMPVSDKPAPVRYSSLVAPRHVSQRRIRL
PARRYQPKSDSQRVPFFGDDEVAPTTPKADALIIPRENPRALIIRPIEQWPSSNGVNTQS
ASKNIVGSSSDNGKIHAVPSAPIVDESYTADLLESPAENGHAEQTPSKPPQQPNGLKDNH
ANRTKDSHFSISSRRASEAAISYEHGADIEALMPKLSLDNYFCEPSIPELAAKERAEPGF
CRRVKDFVIGRKAYGSIKFLGETDVRRLDLESIVQFNHREVVVYSDESKKPSVGQGLNKP
AEVTLLDIKCFNKKTGQRYTGGPKVERYIEMLKKKTEEQGAEFISFDAGKEEWRFRVKHF
SRYEFFGEENDDDCFVC
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctccaccaatccctttgggcagtcttctagcagcccatttggttctccttca
gtctttgggcaaacaaacagtgccgcgaataacccttttgctccaaagccatttgggagt
ccaaatccttttagttctcagacagggctttcagcatttggtgtatcaactggagttttt
gggcagccttcttcacctgcatttggtgcatcttcttcaccggcatttgggagttcaatg
ccttcttttggggcttcatctatcccagcatttgggagctcatattcttcttttggtgga
tcttctgtttttgggcaaaaaccagcttttggaggatttgggtctacttccagccaggct
agtccatttggcggctcatttcaacaaacacagccagcatttggaagcaacatgtttggt
tcttcttcaccattcggtgcttcaagtcaacctgcatttggtgcaaccagtaccccagca
tttggttcaacaagctcaccagcatttggtgcagcttctactcccgcgtttggtgcatca
agtaccccagcttttggtgctaccaacactccagcttttggttctaacacggcgccggca
tttggttctacatcaactccattatttggtaatacaggaatggcattcggggcatccaac
accccagcattcggcgctccaagcacttcattgtttggctctgcaagtactccggcattt
ggtggatcaactactccagcttttggttcttccagttctccagcttttggttcaacaagt
gcatcttccttcagttttggttctgcgccgtcatcttttggccagtcaacacccgcattt
ggcatctcaccgtttggttcaaccccctcgccttttggaactcaaagctctccatttggt
gctcagacatcaacacctacatttggaagtcctggttttggacaatcaacttttgggagt
caagctggaggcagtagaatagcaccttacactgcaacgtatgagcctaatgctaccggt
acacaacctgctggaaagctagaatcaatatctgcaatgcctatttacaaagataaaagc
cacgaggaattgagatgggaggattatcaacgtggtgataaaggtggtccaaatcctgct
ggacaatcaagtggaataagttttccaacatcaacacaatcgaacccattcagtcaaacg
agtgcttttggtcagacaagtccatttggtcaaagtagtgtttttggtcaaactagtgca
tttggtcaggctgctgctaatcctttctcatccaccatctcttcaaatccttttgctcct
aaaactccagcttttggttctactggttttggatcatcatcagcttcacttttcagctca
ccattctcatcatcctcaacaagcccctttggctcaacatcttccaccccttcattattt
ggggcgccttcgtctggttttggctctagcagttcatcctctatttttggcagtggaagt
gctcccgctttcggttcgtctccttctatttttggttcctcaatggtgggatccacttct
tcctttggatctggtctaacttttggcaacactcagtcttctgcgttgttttcttcaact
gcttctcttggtcaaacgccttctccctttgggcagtctactggttttcaacagagcgca
ccagcttttggttcaagtctattcaacacgccatcaactggctttggtggaagcctcttt
agcagttcaacaccttcattgagcaatcctgcaggatttggtcaactgactccctccttt
tccactccttttcaacagtctgctcctgcacaagcatcaagtaacttttcttttggtaac
cttggtcaggcacaaatagctccttctggagggtttggtagcttccccagctcctttaat
cagggaacttttggacagagccctgctattcaggctaacattgtcatgcaacccacgtcc
ataacaaatccttttggaacgcttcctgtgatgcctcagatgtctattggtcgtgtgggc
tcttctgctccatcagttcaatatggaatttccagcatgcctgtttctgacaaaccagct
ccagtaaggtattcttctttagtggctcctagacatgtatcacagagaagaatccggttg
ccagccaggagatatcaacctaaaagcgatagtcaaagggtaccattcttcggtgatgat
gaagtggctccaacgactccaaaggcagatgcactaattatcccaagggagaatccaagg
gcactaatcattcgtccaattgaacaatggccctcttcaaatggtgttaatacacaatca
gcgtcaaaaaatatcgttggttcatctagcgacaatggtaaaattcatgcagtgccatct
gctcccattgttgatgaatcttatacagctgatcttcttgaaagcccagctgagaatggc
catgcagaacaaactccatccaaaccccctcaacaaccaaatggccttaaagacaaccat
gccaacagaaccaaagactcccacttctcaatttcgagccgtcgagccagcgaggctgcg
atctcttatgaacacggcgcagacattgaagccctaatgccaaaactctcccttgacaac
tacttctgcgaaccaagcatccccgaactcgccgccaaagaacgtgccgagcccggtttt
tgtcgccgcgtgaaggatttcgtcatcggccgcaaagcctacggcagcataaaattcctc
ggtgaaactgatgtgaggagacttgatctcgagtccattgttcagttcaaccatcgtgag
gtcgtcgtgtacagcgacgagagcaaaaagccgtccgtcggtcaagggctaaacaaaccg
gctgaagtgactcttcttgacatcaaatgcttcaacaagaaaactgggcagagatatact
ggaggcccgaaggttgagagatatatagagatgttgaagaagaagactgaggaacaggga
gctgagtttatatcatttgatgcaggtaaagaagaatggagattcagagtgaagcatttc
agcagatatgagttttttggtgaggaaaatgatgatgattgttttgtctgttga
DBGET
integrated database retrieval system
