Phalaenopsis equestris: 110019986
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Entry
110019986 CDS
T05601
Name
(RefSeq) regulator of nonsense transcripts UPF3 isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
peq
Phalaenopsis equestris
Pathway
peq03013
Nucleocytoplasmic transport
peq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110019986
03015 mRNA surveillance pathway
110019986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110019986
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110019986
mRNA cycle factors
P-body specific factors
110019986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
110019986
NCBI-ProteinID:
XP_020573573
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MKDPLERTKVVLRHLPPSLTESALMEQIDDKFSGRYKWFFFRPGKNSQKNGRYARAYIDF
KSPADVFEFAEFFDGHIFVNEKGTQFKVLVEYAPSQSIPKSWTKKDGREGSIFKDPDYLE
FLELLAKPTENLPSAEIQLERREAERAGTKEAPIVTPLMDFVRRKRAAKGGSQRTSGNGK
PSRRALVGGHGSSSSSKRGSEKRRGPFLKVQYISKDSAKNGSGKEKPTYILVPRRDEQFT
DKPSKFPFSSIENDNPDETGTDANGLVSGVPVSVETGKKALLLLKGKEREGSHIQRLAVP
GRIIKSILSKEGHQVSASQPDHQMITSNIENDIRPRRPPILHPNSKEQASGAPHKSASDA
DLKSDKVDKDASSELPTSVSISDNKFEKRMRNKDRPDRGVWAPLHRSDAFDGHGGTNLLP
NNEIRAGHRNNKFDAPSLNRSSESKSFGGSRGHHASLDNGANRHSGRRGIVHGSKDLDVP
ASATETKLSKRGANPYEKQVWVQKSGSAS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcctcttgaaaggaccaaggtcgtactgcgacacttgccgccgtcgcttacc
gagtcggctcttatggagcagattgacgacaagttttccggccgttacaagtggttcttc
tttcgcccggggaagaacagtcagaagaatggaagatatgctcgagcttacattgatttt
aagagccccgcagatgtctttgagtttgctgagttctttgatgggcatatatttgtcaat
gaaaaaggcacccagtttaaggttctggtagaatatgctccgtcacaaagcattccaaaa
tcctggactaagaaagatggccgtgaagggtctatattcaaggaccctgactatctagag
tttctcgagcttcttgcaaagcctacggaaaatctccctagtgctgaaattcagcttgaa
aggagagaggctgaaagagctggtacaaaggaggcacctatagtaacacctcttatggat
tttgttaggcggaaacgagcagctaagggtggatctcagagaacatctggtaatggaaaa
ccaagtcgaagagctttagttggtggtcatggctctagttcttcctctaaacgtggttct
gagaagcgaagagggccctttttgaaggtgcagtatatttcaaaggacagtgcaaaaaat
ggttctggcaaggaaaagccaacatacatattagtgccaaggagggatgaacagtttacc
gacaaacccagtaaatttccattttctagtatcgaaaatgacaatccggatgaaacaggg
accgatgccaatggacttgtatctggagtgccggtttctgtagaaacagggaaaaaggca
cttttacttttgaaaggaaaagaacgtgaaggttctcatattcagcggcttgcagtgcct
ggaagaattattaaaagtatattatctaaggaagggcatcaggtgtcagcatctcaacca
gaccatcagatgattacaagtaacatagagaacgatattcgccctcgccggccacctatc
ctgcacccaaattcaaaggaacaagcttctggtgcaccacacaaatctgcttctgatgct
gatttaaaatcagataaagttgataaggatgcttcaagcgaattgcctacttctgtatct
attagtgataataagtttgaaaagcgcatgagaaataaagatagacctgatcgtggggta
tgggcgccccttcatcgctctgatgcttttgatggacatggaggcactaatttgctccca
aacaatgaaataagggcgggccatagaaacaataaatttgatgctccaagtttaaataga
agttcagaatctaagagctttggaggtagccgagggcatcatgcttctttggacaatggt
gccaataggcattcaggccggcggggaatagttcatggttcaaaagatttggatgtccca
gcaagtgcaacggagactaaactatcaaaaagaggcgctaatccatacgaaaaacaagta
tgggttcagaagtccggctctgcttcgtga
DBGET
integrated database retrieval system
