Phalaenopsis equestris: 110020022
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Entry
110020022 CDS
T05601
Name
(RefSeq) serine/arginine-rich splicing factor SR45 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
peq
Phalaenopsis equestris
Pathway
peq03013
Nucleocytoplasmic transport
peq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110020022
03015 mRNA surveillance pathway
110020022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110020022
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110020022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
110020022
NCBI-ProteinID:
XP_020573631
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MAKPGRPRPATSSGSRSRSRSVSSHSRSYSGSDSRSRSRSRARSKSLSSSSSPSESSRSR
SPPPQRRSPPAAGRRGRSRSPPPKRASPPRKVSPPVIESVVLHIDHLSRNVNEAHLKEIF
SNFGELVNVELSMDRNVNLPRGYGYVEFKKRTDAEKARLHMDGGQIDGNVVSVKFTLAQR
QKISSPPKVIPPPKREAPQRDKILPGPEKEVPSRLRESSPRRRPPSPPPRRRSPVAVRRP
DSPRRRPDSPPRRRLDSPVHRRADSPPHRRGETPPRRRAASPIRRRSPSPRRLRSPARVS
PRRLRGSPPRKRSPVPLRRRSPLTRRARSPPRRSPPMRRRSRSPIRRPARSRSRSVSPRS
RGVRAPPRRGRSSSFSRSPSPRKGPRNVAKSRSPRRPARGRSVSNSPSSSSASPKGPKP
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcccggacggcctcgacctgcaacttcttctggctcccgttcccgctcccga
tccgtttcatctcattcgcgctcctactcaggctcggattcccgctcgaggtcgcgctca
cgcgctcgttcgaagtccttgagttcgtcctcttcgcccagtgagagctcccggagtcgt
tctcctcctcctcagagaagaagtcctcctgcagctggaagaagaggccgttctcgatca
ccaccacctaaacgagcctcacccccaaggaaagtatctccacctgttattgaatctgtt
gttctccacattgatcatctatcaaggaatgtcaacgaggcacatttaaaagagatattt
agtaattttggtgagttggtcaatgtggagctttcaatggacagaaatgtcaaccttccc
cggggttatggttatgttgaattcaagaagagaacagatgctgagaaagcccgtcttcac
atggatggtggtcaaattgatggaaatgtggtgtcagtaaagtttactttagcacagcgg
cagaagatttcttcacccccaaaggtgattcctcctccaaaaagggaagcacctcaacgg
gataagatacttcctggacctgagaaagaagttccatcccgtctaagggagtcttctcca
cgtcgtagaccaccatcaccgccgccacgaaggcgatctcctgttgcagttcgtcgccct
gattcacctaggcgtcgacctgattctcctcctcgccgccgtctggattctccagtacac
cgtcgagcagattctcctcctcatcgccgtggagaaacaccacctcgcagaagggctgct
tctcccattaggagacgctcgccctctcccaggcggcttagatcacctgcacgtgtttcc
ccacgaaggctacgtggcagtcctccccgcaagcgctctccagtacctctcaggcggaga
tcaccattaacaaggagagctaggagtccaccaaggagatcacctccaatgcgccgtcgt
agccgttcgcctattcggagacctgctcgttcccgttctaggtcagtgtctccccgcagc
aggggcgttcgagcacctccaagacgaggtagatcttcatccttctccagatcacctagt
cctcggaagggacctcgcaacgtagccaaaagtcgcagtccaagaagacctgctagagga
agatccgtcagcaacagtcccagcagcagctctgcctctcccaaaggacctaaaccttaa
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