Pantoea eucrina: LAC65_04840
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Entry
LAC65_04840 CDS
T07862
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
per
Pantoea eucrina
Pathway
per03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
per00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LAC65_04840 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
per03400
]
LAC65_04840 (uvrB)
DNA repair and recombination proteins [BR:
per03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAC65_04840 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LAC65_04840 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_33
UB2H
UvrD-helicase
DUF87
SBDS_domain_II
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UBB14152
LinkDB
All DBs
Position
1032143..1034164
Genome browser
AA seq
673 aa
AA seq
DB search
MSKVFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDAAVNEHIE
QMRLSATKAMLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTRGMIIDQRSILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESDDMALRVELFDEEVERLSLFDPLTGQIESVIPR
FTIYPKTHYVTPRERILQAMEEIKDELALRRKVLLENNKLLEEQRITQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLRFEEFEALAPQTIYVSATPGKYELEKSGTEVIDQVVRPTGLLD
PILEVRPVGTQVDDLLSEIRKRVEINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYADKITPSMARAIEETERRREKQERYNTEHGIVPQGLNKKITDILELG
KNVVKTRGKGKTATRTAAENDADYLALTPQAMQKKIHELEAQMQQHAQNLEFEEAASLRD
RLHELRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtctttaaactcaactccgcctttaagccttcaggcgatcagcctgaagcg
atccgccgtctggaggaggggctggaagatggccttgcgcatcagaccctgctcggcgta
acgggatcgggcaaaacctttaccgttgccaatgtgattgccgatctcaaccggccgacg
atggttctggcgcctaataaaacgctggcggcgcagctctatggggagatgaaagagttt
tttccggacaacgcggtagaatttttcgtctcttactatgactactatcagcctgaagcc
tatgtgccgagttctgacacctttattgaaaaagatgcggcggtgaacgagcacattgag
cagatgcgcctctccgccaccaaagcgatgctggaacgacgcgatgtcatcgtggtcgcg
tcggtctcggcaatttatggtctgggcgatcccgatctctatctgaaaatgatgctgcat
ctgacgcgcggtatgatcatcgatcagcgcagtattttacggcgtctggctgagctgcag
tatgcgcgtaacgatcaggcgtttcagcgcggtacgttccgcgtgcgcggggaggtgatc
gatatcttcccggcggagtccgacgatatggctctgcgggtggagctgtttgatgaagag
gttgagcggctctcactatttgatccgcttaccggacaaattgagtcagtgatcccgcgc
tttaccatctatcccaaaacgcactacgttacgccgcgcgagcgcatcctgcaggcgatg
gaagagatcaaagatgagctggccctgcgccgtaaggtgctgctggaaaacaacaagctg
ctggaagagcagcgcattacgcagcgcacccagtttgacctggagatgatgaacgagctg
ggttactgctcggggattgagaactactcccgctatctctcgggacgcggaccgggtgaa
gcgccgccgaccctgtttgactatctgccggccgatggtctgctggtggtggatgagtcg
cacgtcacgattccgcagattggcggcatgtatcgcggcgaccgcgcgcgtaaagagacg
ctggtggagtacggcttccgcctgccgtccgcgctggacaaccgtccgcttcggtttgaa
gagtttgaggcgctggccccgcagaccatttatgtctccgccacgccgggtaaatatgag
ctggaaaaatcgggcacggaagtgatcgatcaggtagtgcgtccgacaggtctgctcgat
cccattcttgaggtgcgcccggtcggcacacaggtggatgatctgctctctgaaatccgc
aaacgcgtggagatcaacgaacgcgtgctggtgacgacgctgaccaagcgtatggctgaa
gacctcactgaatatcttgaagagcatggtgagaaggtgcgctatctgcactctgatatc
gataccgttgagcgcatggagattattcgcgacctgcgcctgggcgagtttgacgtgctg
gtagggattaacctgctgcgtgagggacttgatatgccggaggtctccctggtggcgatt
ctcgacgccgacaaagagggcttcctgcgttcagaacgctccctgatccagacgattggt
cgtgcagcgcgtaacgtgaacggcaaagcgattctttatgctgataaaatcacgccctct
atggcacgcgcgattgaagagacagagcgacgtcgcgagaagcaggagcgctacaacacc
gagcacggcattgtgccgcaggggctgaataagaagatcacggatattcttgagctgggc
aaaaacgtggtgaaaacgcgcggcaaaggcaaaacggccacgcgcacggcagcagagaat
gatgctgattacctggcgcttacgccacaggcgatgcagaagaaaattcacgaactggaa
gcgcagatgcagcagcatgcgcaaaacctggagtttgaagaagccgccagcctgcgcgac
cggctgcatgagctgcgcgaactgtttattgccgcctcataa
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