Populus euphratica (Euphrates poplar): 105111615
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Entry
105111615 CDS
T05872
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03082
ATP-dependent chromatin remodeling
peu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105111615
03083 Polycomb repressive complex
105111615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
peu03036
]
105111615
Enzymes [BR:
peu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105111615
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
105111615
HDAC complexes
Sin3A-HDAC complex
105111615
BRAF-HDAC complex
105111615
REST complex
105111615
SHIP complex
105111615
MiDAC complex
105111615
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
105111615
Heterochromatin formation proteins
Other heterochromatin formation proteins
105111615
Chromatin remodeling factors
NuRD complex
105111615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
105111615
NCBI-ProteinID:
XP_011005320
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MRSKDRIAYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSEDYVEFLHRITPDTQHLFAGELARYNLGEDCPVFENLFEFCQIYAGGTIDAAHRL
NNQLCDIAINWAGGLHHAKKCGASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDVKELGEREGKFYAINVPLKDGIDDTSFTRLFKT
IISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPENEYIKYFAPDYSLKSPGGLVVCNCTETPCDFCI
LAAFLIFLLLFCLSEQENLNSKSYLSTIKMQVLDNLRCIQHAPSVQMQEVPPDFYIPDFD
EDEQNPDERMDQHTQDKQIQRDDEYYEGDNDNDHADGS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccaaagacagaattgcctatttctatgatggtgatgtgggcagtgtttatttt
ggaccaaaccatccaatgaagccacacagactttgtatgacacaccatcttgttctctct
tatgagctacacaagaagatggaaatttatagaccacacaaggcatatcctgttgagctt
gctcagtttcattccgaggattatgttgaatttttgcatcggattacgccagatactcag
cacttgttcgcgggggaattggctagatataaccttggagaagattgccctgtcttcgaa
aacttgtttgaattttgtcagatttatgctggtggaactatagatgctgcacataggttg
aacaatcaactgtgtgacattgctataaattgggccggtggattacatcatgcaaaaaag
tgcggggcatctggtttttgttacatcaatgacctggttttggggattttggagcttttg
aaacaccatgctcgtgttctgtacattgatatagatgttcatcatggtgatggtgttgaa
gaagccttttatttcactgacagggtgatgactgtgagttttcacaagtacggagatatg
ttctttcctggaactggtgatgttaaggaactaggagaaagagaaggaaaattttatgct
ataaatgtaccactgaaagatggaatcgatgacacaagcttcactcgactatttaaaaca
atcatttccaaggttgtagaaacttatcagccaggtgcaatagttcttcaatgtggagca
gattcgttggctggtgaccgcttgggctgcttcaatctttccattgatgggcatgcagaa
tgtgttaggtttgtgaagaaattcaacttgcccttgttggttacaggaggtgggggatac
acaaaagagaatgttgctcgatgttggaccgttgaaacaggagttcttttagacacagaa
ctgcccaatgagattccagaaaacgagtatattaaatactttgctcctgattattcattg
aaaagtcctggtggactcgtggtatgtaactgcactgaaactccctgtgatttctgcatt
cttgcagccttcctaatatttcttctgcttttttgtttgagtgagcaggagaacttaaat
agcaaatcttatcttagcacaatcaaaatgcaagtactagacaatctccgttgcatccaa
catgctccaagtgtacagatgcaggaggtacctcctgacttctatattcctgattttgat
gaagatgagcaaaaccccgatgagcgcatggatcagcatacgcaggacaagcaaatccaa
cgcgacgatgaatattatgaaggcgacaatgataatgaccacgcggatggctcatga
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