KEGG   Populus euphratica (Euphrates poplar): 105111615
Entry
105111615         CDS       T05872                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03082  ATP-dependent chromatin remodeling
peu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105111615
   03083 Polycomb repressive complex
    105111615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:peu03036]
    105111615
Enzymes [BR:peu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     105111615
Chromosome and associated proteins [BR:peu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     105111615
   HDAC complexes
    Sin3A-HDAC complex
     105111615
    BRAF-HDAC complex
     105111615
    REST complex
     105111615
    SHIP complex
     105111615
    MiDAC complex
     105111615
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     105111615
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105111615
  Chromatin remodeling factors
   NuRD complex
    105111615
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 105111615
NCBI-ProteinID: XP_011005320
LinkDB
Position
Unknown
AA seq 458 aa
MRSKDRIAYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSEDYVEFLHRITPDTQHLFAGELARYNLGEDCPVFENLFEFCQIYAGGTIDAAHRL
NNQLCDIAINWAGGLHHAKKCGASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDVKELGEREGKFYAINVPLKDGIDDTSFTRLFKT
IISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPENEYIKYFAPDYSLKSPGGLVVCNCTETPCDFCI
LAAFLIFLLLFCLSEQENLNSKSYLSTIKMQVLDNLRCIQHAPSVQMQEVPPDFYIPDFD
EDEQNPDERMDQHTQDKQIQRDDEYYEGDNDNDHADGS
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgcgctccaaagacagaattgcctatttctatgatggtgatgtgggcagtgtttatttt
ggaccaaaccatccaatgaagccacacagactttgtatgacacaccatcttgttctctct
tatgagctacacaagaagatggaaatttatagaccacacaaggcatatcctgttgagctt
gctcagtttcattccgaggattatgttgaatttttgcatcggattacgccagatactcag
cacttgttcgcgggggaattggctagatataaccttggagaagattgccctgtcttcgaa
aacttgtttgaattttgtcagatttatgctggtggaactatagatgctgcacataggttg
aacaatcaactgtgtgacattgctataaattgggccggtggattacatcatgcaaaaaag
tgcggggcatctggtttttgttacatcaatgacctggttttggggattttggagcttttg
aaacaccatgctcgtgttctgtacattgatatagatgttcatcatggtgatggtgttgaa
gaagccttttatttcactgacagggtgatgactgtgagttttcacaagtacggagatatg
ttctttcctggaactggtgatgttaaggaactaggagaaagagaaggaaaattttatgct
ataaatgtaccactgaaagatggaatcgatgacacaagcttcactcgactatttaaaaca
atcatttccaaggttgtagaaacttatcagccaggtgcaatagttcttcaatgtggagca
gattcgttggctggtgaccgcttgggctgcttcaatctttccattgatgggcatgcagaa
tgtgttaggtttgtgaagaaattcaacttgcccttgttggttacaggaggtgggggatac
acaaaagagaatgttgctcgatgttggaccgttgaaacaggagttcttttagacacagaa
ctgcccaatgagattccagaaaacgagtatattaaatactttgctcctgattattcattg
aaaagtcctggtggactcgtggtatgtaactgcactgaaactccctgtgatttctgcatt
cttgcagccttcctaatatttcttctgcttttttgtttgagtgagcaggagaacttaaat
agcaaatcttatcttagcacaatcaaaatgcaagtactagacaatctccgttgcatccaa
catgctccaagtgtacagatgcaggaggtacctcctgacttctatattcctgattttgat
gaagatgagcaaaaccccgatgagcgcatggatcagcatacgcaggacaagcaaatccaa
cgcgacgatgaatattatgaaggcgacaatgataatgaccacgcggatggctcatga

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