Populus euphratica (Euphrates poplar): 105121792
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Entry
105121792 CDS
T05872
Name
(RefSeq) uncharacterized protein LOC105121792 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105121792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105121792
03019 Messenger RNA biogenesis [BR:
peu03019
]
105121792
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105121792
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
105121792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
Motif
Other DBs
NCBI-GeneID:
105121792
NCBI-ProteinID:
XP_011018890
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
MEMESTRRSFDRSREPGLKKPRLAEEQANHKGRPFTQRPAAAPSARYRPGVDRDLDSNDS
NRSSAYQPQPVPQPQQYQELVSQYKTALAELTFNSKPIITNLTIIAGENLHAAKAVAATI
CANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDSSVHSSMRHL
FGTWKGVFPPQPLQMIEKELGLAPAVNGSSAGAAASRSESQSQRPPNSIHVNPKYLERQR
IQQSSRAKGVSNVLTVPVANSIEDVEGPDRAVGIDTRRPWVDPPVKTHTLQRSHREAISE
PVHEKKKVGAIYGDFEYGPDVSRKSGLGIGRASGRVAEQGQGQENPWYGTSSNAAELISG
QRNGFNMKHGFPNYPASKSSMVDLHLQPTQRIGRSETGISANWKNSEEEEYIWDVHSRLS
DHNAAGLSNNSRKDQWIPDDSEKMDLERFDGETSSDSLSTERKEHATIGLRSSSPWKLPE
SHSTDGLINSGTSTTNTGHLEGYSATIGGVATSSRSSLGRMAVRPVLGSSHIGKAGLASS
KNTSLLSTETLGQQKFQSQGAASPSGQSPIHQRPSSPTFQACYPQLQNSGEQDYHQSQSM
TQPDFRAQFSGNLLPSNVQLGNLPKLQSEELQAPSLPSFQLSHQHHLSQPRQSDSKESEA
FGQIQRPHLPPVSNFGTSSTSVSSAADHLNPFTAGTSGQSSTSSLLAAVMKTGILSKINS
GIVPDQNFQDIGKMPSQSIIQPPLPSGPPPQFLFSGARIESASSAAAQSQDKLPTVLNIS
QRKEERPPPPLGSPPSSEQTTDAVNKAPNPISNLLSSLVAKGLISTSKSETSSPSAMQVP
SQLQKKNPSIASPSSEPISSATLHSSTVGEASIPEPDTKCSVALSQTTKVEIDDLIGLEF
KPEVIRELHPPVISSLFEDLPHRCSLCGLQLKLKERLHRHLEWHNQRKPESDGINGATRG
WYADLGDWLTEKEGLPLGVESSSPMDGFEETMECDDKMVLAHEDHCVCVLCGKLFEDYYC
EERNKWMFKGAVCMTLPSGDGLIGTTKESAKGPIVHVNCISESSLCDLGLATSIKMVKEL
KFLEEKDVYAST
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagagtacgcgtagatccttcgatagatcaagagaaccaggcttaaagaaa
cctcgattagctgaagagcaagcaaaccataagggccgcccgttcacgcagagaccggca
gctgcaccttctgcaagatataggcctggagttgatagagatttagacagtaatgattcg
aatcgcagcagtgcataccagccacagccagtgccacagccacagcaataccaggagcta
gtgagtcagtataagactgctttggcggagctgactttcaattcaaagccaataatcact
aacttgactataattgcgggtgagaatctccacgccgccaaagctgttgctgcgacaatc
tgtgccaatattcttgaggttcccagtgagcaaaagcttccatctctttatcttttagac
agcattgtgaagaatattgggagggattacataaaatactttgctgccagactgcctgag
gtattctgtaaggcatataggcaggttgattcctctgtacattcaagtatgcggcatctt
tttggaacttggaaaggagttttccctcctcagccacttcagatgattgagaaggaactt
ggccttgctcctgcagtgaatggttcatctgcaggtgctgcagcgtccaggtctgagtct
caatctcaacggccaccaaatagcatccatgtcaatcccaagtacttggaaaggcagcgc
attcagcagtctagtagggcaaaaggagtgtctaatgtcctgactgttccagtagccaac
tcaattgaggatgtggagggcccagacagagctgtcggtattgatactcgacgcccatgg
gtggatcctcctgttaaaacacatactcttcaacgctcacatagagaagcaataagtgag
cctgttcatgagaagaaaaaggttggtgccatatatggggactttgaatatggtcctgat
gtttcaaggaagtctggcttgggaattggaagagcaagtggaagggttgctgagcaaggg
caagggcaggagaacccatggtatggaactagcagcaatgcggcagagctaatatctggg
caaagaaacggttttaatatgaagcatggatttccaaattacccagcatccaagtcttct
atggtcgatttacatctacagccaacacagagaattggaagaagtgagactgggatatct
gctaactggaaaaactctgaggaagaggagtacatttgggacgtgcactctagattatca
gatcacaatgcagccggtctttccaataactcaaggaaagatcagtggattcctgatgat
tcggaaaaaatggatcttgaaagatttgatggagaaacttcttcagactcgttgtctacc
gagcggaaagagcatgccaccattgggctccgttcatcctcaccatggaaattgccagag
tcccactcaacagatggattgatcaattctggcacttctactactaacacaggtcactta
gagggctattcagccactattggtggtgtggctacaagttcaaggtcttcattgggcagg
atggctgttcgaccagtcttgggttcatctcatattggaaaggcaggcttagcatcttcc
aaaaacacatcattgttgtccactgaaaccttagggcaacaaaagtttcagtcccaaggt
gctgcatcaccatctggacagtcacccatacaccaacgaccatcctcacccacatttcaa
gcatgctatccacaattgcagaattcaggagagcaagactaccatcaatcccagtcaatg
acccagcctgattttagggctcaattttcaggaaatttgctgccttcgaatgttcagctt
ggtaacttgccaaaattgcagtctgaagaattacaggctccttcattaccctcttttcaa
ctaagccaccagcatcatctttcacagccacgacaatcagattccaaagagtctgaagct
tttggtcagatccagaggccacacctgcccccagtctccaattttggaacttcatcaact
tctgtaagttctgcagcagaccatttaaatccatttactgcaggaacttcaggacaatct
agtacaagtagtttgctggctgctgttatgaagactggaattctttccaaaataaattct
ggtattgtacctgaccaaaactttcaggatattgggaaaatgccatcacagtcaattatt
cagcctcctcttccaagtgggcctccccctcagtttttgttttcaggagccaggattgaa
tctgcatcttcagctgctgctcagtcacaagataagttgccaacagtgttgaatatttct
cagaggaaagaagagcggccaccacctccacttggttctccaccttcatcagaacaaact
actgatgctgttaataaagccccaaatccaatttcaaaccttttgagctcattagttgcg
aagggtttgatatctacatcaaagtcggagacatcatctccttcggcaatgcaggtacct
agtcaactacaaaagaagaacccaagcatcgcttcccctagctctgaaccaatttcctct
gccactctgcattcatccacagtaggtgaagcatctatcccagaacctgataccaaatgt
tctgttgcactgtcgcaaaccaccaaagtggaaatagatgatctcataggattggagttt
aagccagaagtaatccgagaactgcatccacctgtgatcagttcactctttgaggacctt
cctcatcgatgcagcttatgtggccttcaacttaaacttaaagaacgtcttcatagacac
ctggagtggcataaccagaggaagccagaatcggatggtataaatggggcaactagggga
tggtatgctgatttaggggactggcttactgaaaaggaaggacttccattgggagttgag
tcttctagcccaatggatggttttgaagagacaatggaatgtgatgataaaatggttctt
gctcatgaagatcattgtgtttgtgttttgtgtggtaagctttttgaagattattattgt
gaagaaaggaataaatggatgttcaaaggagcagtttgtatgacgttaccatccggagat
ggtctgataggaaccacaaaggagagtgctaaaggtcccattgtgcatgtgaattgtata
tctgaaagttcactttgtgacttgggactagcaaccagcattaaaatggtaaaggagctt
aaatttcttgaggaaaaggatgtgtatgcctcaacctga
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