Populus euphratica (Euphrates poplar): 105128051
Help
Entry
105128051 CDS
T05872
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03022
Basal transcription factors
peu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105128051
09124 Replication and repair
03420 Nucleotide excision repair
105128051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105128051
03400 DNA repair and recombination proteins [BR:
peu03400
]
105128051
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105128051
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105128051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
105128051
NCBI-ProteinID:
XP_011027858
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MPQVRIIAKNFMDMVASLPAMKLDRLYQNAFICEAILRSLPPLAKKYVVQILFFDGPVSG
KLLEQWVLADGLTKHRVAIDRLIQLRIFIEISDKKRESSYKLNQTFQANLRKHLTNGGVL
PRETMAAVVKLPSLEELDTYALEQWECFLLLLISSGQAEKPTSLSSSMMKIFQRGLLSQR
DRDAPRLTEGGFQFLLMDTNAQLWYIIREYITNSEERGTDPADLISFLLELSFHVTGEAY
NINTLTEIQRNTIKDLAELGLVKLQQVILVWAIGRKDSWFIPTKLATNLSVSLTDSSSRK
QGYVVVETNFRLYAYSSSKLHCEILRLFSKIEYQLPNLIVGAITKESLYTAFENGITSDQ
IISFLQQNAHPRVAERLPSVPENVTDQIRLWEADLNRVEITPAHFYDEFPSRDTFEAACD
FAREWNGLLWEDSKKMRVVVKAEIHMNMREFLRGQK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagtgagaatcattgcaaagaatttcatggacatggtagcttcgttaccagcc
atgaaactcgacaggctctatcaaaacgcattcatctgcgaagccatactcaggtcattg
ccgcctttagcgaagaaatatgtagtacaaattttgttttttgacggcccagtatcaggt
aaattgctggagcaatgggtgcttgctgatgggctcaccaaacatagagttgctattgat
cggttgattcagttgagaatttttattgaaatttctgacaagaaaagggagagtagttat
aaattaaaccagacatttcaggctaatctacgaaagcatttaacaaatggtggagttttg
ccaagggaaacaatggctgcagttgtaaaactccctagcttggaggaattagatacctac
gcacttgaacaatgggagtgttttttgctacttcttataagctctggccaagcagaaaag
ccaactagcttgagctcttccatgatgaaaatttttcagcggggtcttttgtctcagagg
gacagagatgctccaagattaactgagggtggttttcagtttttgctgatggatacaaat
gcacagctgtggtacatcatcagagaatatatcactaattctgaggagagaggtacagat
cctgcggatctgatttcttttcttctggagcttagctttcatgtcactggcgaggcatat
aatatcaatacattgactgagattcagagaaatactatcaaggaccttgcagaattggga
ttggttaaacttcagcaggttattctagtttgggctattggaaggaaagatagttggttt
atacctactaaattggctacgaatctttcagtgagcttaacagattcatcatcacggaaa
cagggatatgttgttgtagaaaccaactttagattgtatgcgtactcatcatcaaaactt
cattgtgaaattctacgtcttttctcaaagatagaatatcaacttccaaaccttatagtt
ggagcaataacaaaagaaagtttgtatacagcttttgaaaatggcatcacatctgaccaa
ataatttcttttctccagcagaatgctcatcctcgtgtggcagagagattaccatcagtt
cctgaaaatgtcactgatcagattagattgtgggaagcagatctgaacagggttgagata
acccccgcacatttctatgatgagtttccatctagggatacatttgaggctgcttgtgac
tttgcacgggagtggaatggtttgctgtgggaggattcaaaaaaaatgcgggttgtagtg
aaggcagaaattcacatgaacatgcgagagtttcttcgtggtcaaaagtag
DBGET
integrated database retrieval system
