KEGG   Populus euphratica (Euphrates poplar): 105134750
Entry
105134750         CDS       T05872                                 
Name
(RefSeq) exosome complex component RRP41 isoform X1
  KO
K11600  exosome complex component RRP41
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105134750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:peu03019]
    105134750
Messenger RNA biogenesis [BR:peu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     105134750
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     105134750
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 105134750
NCBI-ProteinID: XP_011037592
LinkDB
Position
Unknown
AA seq 241 aa
MEFVNPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ
QINDQALVRCEYSMANFSTGDRRRKPKGDRRSTEISLVIRQTMEECILTNLMPRSQIDIY
VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGFLNSTPLLDLNYVEDSAGGPD
VTVGILPKVDKVTLLQMDAKLPIDTFENVMQLAVEGCKAIANYIREVLLENTKQLEYRRG
L
NT seq 726 nt   +upstreamnt  +downstreamnt
atggagttcgtgaaccctgaaggtcttcgtctggatggtcgccgccccatggaaatgagg
caacttagagcacaaatcggtgctgtagccaaagcagacggctctgctgtttttgagatg
ggaaatactaaagtaattgctgccgtttatggacctagagaggttcaaaataggagccaa
cagattaacgaccaagcactggtgcggtgtgagtacagcatggctaatttcagtacagga
gatcggaggcgaaaaccaaagggtgacaggcgatcaacagagatttcgttggttattcgt
cagacaatggaagaatgcatattgacgaatctaatgccccgttctcagattgatatatat
gtgcaagttctccaagctgatggaggaactagatctgcatgcatcaatgctgcaactttg
gccttagcagatgcaggtatccccatgcgtgatcttgttacttcttgtagtgctggattc
ctcaatagcactcctcttcttgatttaaactatgttgaagacagtgcaggaggtcctgat
gtcactgttggaatcctacccaaggtggacaaagtgacacttcttcagatggatgctaag
ctgccaattgatacctttgaaaatgttatgcaacttgctgttgaaggctgcaaggcaata
gcaaattacattcgtgaagttttgctagagaataccaaacagctggagtatagacgtggc
ttgtag

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