Populus euphratica (Euphrates poplar): 105142239
Help
Entry
105142239 CDS
T05872
Name
(RefSeq) ABC transporter A family member 1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105142239
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
peu02000
]
105142239
Transporters [BR:
peu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
105142239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
SMC_N
RsgA_GTPase
AAA_22
AAA_29
nSTAND3
HUN
Motif
Other DBs
NCBI-GeneID:
105142239
NCBI-ProteinID:
XP_011048073
LinkDB
All DBs
Position
Unknown
AA seq
1891 aa
AA seq
DB search
MGNSTRQLKAMLRKNWLLKIRHPFITSAEILLPTIVMLLLIAVRTRVDLQIHPAQAYIKE
NMLVEVGKGMSPNFQEVLEALLVRGEFLAFAPDKEETRTMINLMSIKFPLLQQVSLIYKD
ELELETYLTSDLYGTCSQVKNCSNPKIKGAVVFHNQGPQLFDYSIRLNHTWAFSGFPDVR
TIMDVNGPYLNDLELGVNIIPTMQYSSSAFFTLQQVVDSFIIFASQQTETESSTEHIELP
SSNSFNKSSSLKLPWTKFSPSKIRIAPFPTREYTDDQFQSIIKSVMGVLYLLGFLYPISG
LISYSVFEKEQKIREGLYMMGLKDGIFHLSWFITYALQFAISSGIITACTLNNLFKYSDK
SVVFVYFFSFGLSAIMLSFLISTFFTRAKTAVAVGTLSFFGAFFPYYTVNDPAVPMILKV
LASLLSPTAFALGSINFADYERAHVGLRWSNIWRESSGVNFLVCLLMMLFDTLIYCAIGL
YLDKVLPRENGMSYPWNFLFQKCFWRKNNFVKHHGSSLESNFNDEISNERASFLGNNTHE
PAVEAISLDMKQQELDKRCIQIRNLRKVYASKRGNCCAVNSLQLTLYENQILALLGHNGA
GKSTTISMLVGLLPPTSGDALVFGKNITTDMDEIRNGLGVCPQNDILFPELTVREHLEIF
AALKGVKEDILERIVTDMVNEVGLADKVNTAVRALSGGMKRKLSLGIALIGNSKVVILDE
PTSGMDPYSMRLTWQLIKRIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFL
KHQYGVGYTLTLVKSSPTASVASDIVYRHVPSATCVSEVGTEISFKLPLASSVSFESMFR
EIESCMRRSISKSEMSSSEDKSYPGIESYGISVTTLEEVFLRVAGCGYDETDDFVDRNNI
LSSNSTVPAAYDNRPSETIFDAKILGNYKKIIGFISAMVGRFSGLMAAAILNFINFLGMQ
CCSCCMISRSTFWQHTKALFIKRAISARRDRKTIVFQLLIPAIFLLFGLLFLKLKSHPDQ
QSVTLTTSHFNPLLSGGGGGGPIPFDLSLPIAKEVAGYIKGGWIQNFRQSAYRFPDAERE
LADAIKAAGPTLGPVLLSMSEFLMSSFNESYQSRYGAVVMDKQHDDGSLGYTILHNSSCQ
HAAPTFINIMNAAILRLATGDQNMTIQTRNHPLPMTKSQHLQHHDLDAFSAAIIVNIAFS
FIPASFAVAIVKEREVKAKHQQLISGVSVLSYWVSTYIWDFISFLIPSSFALLLFYIFGL
DQFIGKDCFLPTFLMFLEYGLAIASSTYCLTFCFSEHSMAQNVVLLVHFFTGLILMVISF
IMGLIQTTASANNLLKNFFRLSPGFCFADGLASLALLRQGMKDKSSNAVFDWNVTGASLC
YLGFESIGYFLLTLGWELLPFHKLTPVGIKRYWRSIMNLHHDTHDLEPLLKSPSETVDLN
FDEDIDVKTERNRVLAGSVDNAIIYLRNLRKVYPGEKHRTKVAVRSLTFSVQAGECFGFL
GTNGAGKTTTLSMLTGEESPTDGSAFIFGKDMRSNPKAARRHIGYCPQFDALLEFLTVQE
HLELYARIKGVADYRIDDVVMEKLVEFDLLKHANKPSFTLSGGNKRKLSVAIAMIGDPPI
VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGRLR
CIGSPQHLKTQFGNHLELEVKPTEVSSVDLENLCQTIQSRLFDIPSHPRSLLDDIEVCIG
RIDSITSENASVMEISLSQEMIILIGSWLGNEERVKTLISSTPISDGVFGEQLSEQLVRD
GGIPLPIFSEWWLAIEKFSAIDSFILSSFPGAAFQGCNGLSVKYQLPYSKDLSLADVFGH
VEQNRNQLGIAEYSISQSTLETIFNHFAASC
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggggaactcaacgaggcagttgaaggctatgcttcgtaagaattggcttctcaaaatt
cgccatccttttatcacttctgctgagatcttgcttcctacaattgtaatgttactgcta
atagcggtgcggacaagagttgatttgcaaattcaccctgcgcaggcgtatataaaggaa
aatatgcttgtagaagtaggaaagggtatgtccccgaattttcaagaagttttggaggca
ttgctggtgaggggagagtttttggcttttgcaccagataaagaagaaacaaggacgatg
attaacttaatgtcaatcaagttccctctactgcagcaagtttctctgatctacaaagat
gaactcgagttggaaacatatttaacctctgatctttatggcacctgcagtcaagtcaag
aattgctcaaatccaaaaatcaaaggagcggtagtatttcataatcaaggtcctcagcta
tttgattacagtatacggcttaaccacacatgggctttctctgggtttcctgatgttaga
accataatggatgtgaatggaccttatctcaatgacttggaactgggtgttaatataata
ccgaccatgcaatacagctccagtgcttttttcactcttcagcaggtagtggattcattc
ataatatttgcctctcagcaaactgaaactgagtcttcaactgaacatatagaactgcca
tcgtccaattcattcaacaaatcttcctcgctcaagttgccatggacaaaatttagccct
tcaaaaattagaatcgctccctttccaacacgtgaatataccgatgatcaatttcagtca
attatcaagagcgtcatgggagtattgtatcttttgggatttctctacccaatctctggc
cttatcagttattctgtgttcgagaaggaacaaaagataagagaaggtctctacatgatg
ggcttgaaagatgggatattccatctttcttggtttattacatatgctttgcagtttgca
atttcatctgggattattacagcttgcaccttgaataaccttttcaagtacagcgacaag
tcagtggtgtttgtgtattttttttcatttggactcagtgcaattatgctgtcctttttg
atatctacattcttcacacgagcaaaaacagcagtggcagttggtaccctttcgtttttt
ggggccttctttccttattacactgtcaatgacccggctgtccctatgatattgaaggtc
cttgcctctttgctatcacctacagcctttgctctcggatcaattaactttgccgattac
gagcgtgctcatgttggacttcgctggagcaacatatggcgggagtcatctggggtgaat
tttttggtctgtcttctgatgatgttatttgacacattgatatactgtgctattggcctg
taccttgataaggtccttcccagggaaaatgggatgagttacccatggaacttcttattc
cagaagtgcttctggaggaagaataattttgtcaaacatcatggttccagtttagaatcc
aactttaacgatgagatttccaatgaaagggcaagctttttaggaaataatacccatgaa
cctgctgttgaagcgataagcttagatatgaagcaacaagaacttgataaaagatgcatc
cagattaggaatctgcgtaaggtgtatgcttctaaaaggggaaactgttgtgctgtcaat
tctttgcagcttaccttatatgaaaatcagattcttgctcttctaggacataatggagct
ggaaaaagcacaacaatttcaatgcttgttggtcttcttcctcctacttctggggatgct
ttagtatttggaaagaatatcacaacagacatggatgagatacggaatggactgggtgtc
tgccctcaaaatgatatcctttttccagaattgactgtgagagaacatttagaaattttt
gctgcattgaagggtgtgaaggaagatattttggagaggatcgtaactgatatggtcaat
gaagtgggtctggctgataaggtcaatactgctgtgagggctctttctggtggcatgaag
aggaaattatctctgggaattgcactgataggaaatagcaaggtcgtaattcttgacgaa
cctacgagtgggatggatccatactcaatgcgcttgacgtggcagttaataaaaagaata
aagaagggcaggataatcttacttacaacacactcgatggatgaagctgatgaactagga
gatcggatagctatcatggctaatggatccttgaaatgctgtggaagctccctatttttg
aagcatcagtatggggttggttatacccttacattagtgaagtcgtcacctactgcttct
gtggcttctgatattgtttaccgccatgttccatctgcaacatgtgtgagcgaggttgga
actgagatttctttcaagctgcctttggcatcatcggtttcttttgaaagcatgtttagg
gaaattgaaagttgcatgagaagatcaatttctaaatcagaaatgagtagcagtgaggac
aaaagttatcctggcattgaaagttatggtatttcagtcacaactctggaagaggtattc
ctgagagttgcaggatgcgggtatgatgaaactgatgatttcgtggacagaaacaacatt
ctttcatctaactctacagttcctgcagcttatgacaatcgcccttccgaaacaattttt
gatgcaaaaattttgggaaattataaaaagattattggattcatatctgccatggtgggg
agattctctggtttaatggccgccgcaatcttaaatttcatcaatttcttaggtatgcag
tgctgtagctgctgtatgatttcaagatcaacattttggcagcatactaaggcattattc
ataaagagggctatatctgctcggagagataggaaaacaattgttttccaacttctaatt
cctgccattttcttgctttttggtcttctttttctcaagcttaagtcacatcctgatcag
cagtctgttactctaacaacttcacattttaatcctctcttaagtggtggtggtggtggt
ggtccaattccttttgatctatccttgcctattgcaaaagaggttgctggatatattaaa
ggggggtggattcaaaactttagacagagtgcatacagattccctgatgcagagagggaa
ttggctgatgcaatcaaggcagcaggaccaactttgggaccggttttactttctatgagt
gaatttttaatgtctagctttaatgaatcctatcagtcaaggtatggggctgttgtgatg
gataaacaacatgatgatggaagcttgggatataccattctacacaacagttcctgtcag
catgctgctccaacctttatcaatataatgaatgctgcgattttgaggcttgctactggt
gatcaaaatatgacaattcaaacacgcaaccaccctctgccgatgaccaaaagccagcac
ttacaacatcatgatttggatgccttttctgctgcaattattgtcaatatcgccttctca
ttcattcctgcttcattcgcagttgccattgtgaaggaacgtgaagttaaggcaaagcac
caacaattgattagtggggtttctgtactttcatattgggtttctacatacatctgggac
ttcattagcttcttaattccttcatcttttgctctcttactgttctatatttttggtctg
gaccagtttattggaaaggattgcttcttgccaactttcctcatgttcttagagtatgga
ctagcaattgcttcttcaacatattgccttaccttctgcttttctgaacactctatggct
cagaatgtggttctgttggtccactttttcactgggttgattctcatggttatctcattt
atcatgggccttatacaaacaacagcaagtgcaaataatttgctaaagaacttcttcaga
ttatcaccaggattttgcttcgctgatggactcgcttcactggctcttctaagacaaggg
atgaaagataaatctagtaatgcagtttttgactggaatgtaactggtgcttccctttgt
tatctcggctttgagagcatcggttactttcttctcacacttgggtgggaactgttgcct
tttcacaaattgactccagtaggaattaagcggtattggaggagcatcatgaatctccat
catgacactcatgatttagaaccacttctaaaatctccatcagaaactgttgatctcaac
tttgatgaagacatagatgtgaaaacagaaagaaatagggtacttgcaggttccgttgac
aatgctatcatctacttgcgtaaccttaggaaggtatatcctggagaaaaacatcgtaca
aaagttgctgtgcgttctttgactttctcagttcaagcaggagaatgttttggcttttta
ggaacaaatggagctgggaagacgactacattgtcaatgttaactggagaggaatcccca
actgatggaagtgcttttatttttggtaaagacatgcgttcaaatcccaaggctgcccgt
cggcatattgggtattgtccccagtttgatgctctattggaatttttaactgtccaagag
catcttgagctttatgcaagaataaaaggagttgcagattacagaatagatgatgttgta
atggaaaagttggtggagtttgacttgctgaagcatgccaacaaaccatctttcactctt
agtgggggaaacaaacgcaagttgtctgttgcaattgcaatgattggagatccacctatt
gtaattcttgatgagccatcgacaggcatggatcctattgctaaacgattcatgtgggaa
gtcatatctcgtttgtcaaccagacaagggaagacagcagtaattcttactacccacagc
atgaatgaagctcaagcactgtgcacccgaataggaataatggttggaggccgattaaga
tgcattggaagtcctcagcatttgaaaacacaatttggaaatcaccttgaactagaggtt
aagcctaccgaagtcagctctgtagatttggaaaacctttgccaaaccattcaaagcaga
cttttcgacattccttcacatccaagaagtttacttgatgacattgaagtttgcattggg
agaattgactccattacatctgaaaatgcatcagtgatggagatcagcttgtctcaagaa
atgattattttgattggaagctggcttggaaatgaagaaagagtgaagacacttatatct
tcaacacccatttctgatggggtctttggtgaacagttatcagagcagttggttcgagat
ggtgggatacctttgccaatattttcagagtggtggttagctatagagaagttttctgct
attgattcatttatcctgtcatcctttcctggggcagcatttcaaggttgcaatggtttg
agtgttaaatatcagttgccatatagtaaggacctatcgcttgcagatgtttttggacac
gtcgaacaaaatagaaatcaactgggcatagcagaatacagtatcagccagtcaacactt
gagaccatttttaatcattttgcagcaagttgttga
DBGET
integrated database retrieval system
