Paraburkholderia edwinii: KZJ38_08610
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Entry
KZJ38_08610 CDS
T07588
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pew
Paraburkholderia edwinii
Pathway
pew03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KZJ38_08610 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pew03400
]
KZJ38_08610 (uvrB)
DNA repair and recombination proteins [BR:
pew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KZJ38_08610 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KZJ38_08610 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Kinesin
AAA_16
UB2H
IlvC
AAA_22
FlaG
Motif
Other DBs
NCBI-ProteinID:
QYD70335
LinkDB
All DBs
Position
1:1928584..1930677
Genome browser
AA seq
697 aa
AA seq
DB search
MSEHHLSEVNDTLDESKFVSFEDSPFKLYQPYPPAGDQPTAIQTLVEGVEDGLSFQTLLG
VTGSGKTYTMANTIARLGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPE
AYVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMIL
TLRTGDRLGQREVIARLIAMQYTRNEADFQRGTFRVRGDTIDVFPAEHAEMAVRIELFDD
EIDTLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRETVMRAVETIKSELRERLEFFHSQGK
HVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGALPGEPPPTLVDYLPPDALMLLDE
SHVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFNEFEHKMRQVVFVSATPADY
EKKTAGQVAEQVVRPTGLVDPEIEVRPARSQVDDVLGEINERVKAGERVLVTVLTKRMAE
QLTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRAERSLIQTIGRAARNVNGKAILYADNVTDSMRRAIDETERRRAKQIAYNA
ERGIVPRGVVKRIKDIIDGVYNADEARTELREQQQRAKFEDMSEKQLAKEIKRLEKQMMD
YAKNLEFEKAAQARDQLALLRQRVFGANVGDHLTGTD
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacatcacctgagtgaagtcaacgacacgcttgacgaatccaaattcgtctcg
ttcgaagactcgccgtttaagctctatcagccgtatccgccggccggcgaccagccgacg
gcgatccagacgctcgtcgaaggcgtcgaggacgggttgtcgttccagacgctgctcggc
gtgaccggctccggcaagacctacacgatggcgaacaccatcgcgcgcctgggccgcccg
gccatcgtgttcgcgccgaacaagacgcttgccgcgcagctgtacgccgagtttcgcgag
ttctttccgcgcaatgcagtcgagtacttcgtgtcgtactacgactactaccagccggaa
gcgtatgtgccgcagcgcgacctgtttatcgagaaagactcgtcgatcaacgagcacatc
gaacagatgcgtctgtccgcaacgaagagcctgatggagcggcgcgatgtggtgatcgtc
gcgaccgtatcggcgatctacggtatcggtaatccgtccgaataccaccagatgattctt
acgctgagaaccggcgatcggctggggcagcgcgaggtgatcgcgcggctgatcgccatg
cagtacacgcgcaacgaggccgatttccagcgcggcacattccgcgtgcgtggcgacacg
attgacgtgtttccggccgagcacgccgaaatggccgtgcgcatcgaactgttcgacgac
gaaatcgacacgctgcaactgttcgatccgctgacgggccgcgtgcgccagaagattccg
cgcttcaccgtttacccgtcttcgcactatgtgacgccgcgcgaaaccgtgatgcgcgcc
gtcgaaacgatcaagtccgaactgcgcgagcggctcgagttcttccattcgcaaggcaag
cacgtcgaagcgcagcgtctcgagcagcgcacgcgcttcgacctcgagatgctgcaggaa
ctcggcttctgcaaaggcatcgagaactactcgcggcatttctccggcgcgttgccgggc
gagcctccgccgacgctggtcgactatctgccgcctgatgcgctgatgctgctcgacgaa
tcgcacgtcctgatcggtcagttgaacggcatgtacaacggcgaccgcgcgcgcaaggaa
aacctcgtcgactacggttttcgcctgccttccgcgctcgataaccggccgctcaagttc
aacgaattcgagcacaagatgcgccaggtcgtgttcgtttccgcgacgcccgccgactac
gagaagaagaccgccggccaggtggcggagcaggtcgtgcgaccgacgggcctcgtcgat
cccgagatcgaagtgcgtccggcgcgcagccaggtcgacgatgtgctcggcgaaatcaac
gagcgtgtgaaagccggcgaacgtgtgcttgtcacggtgctgacgaagcgtatggctgag
cagctgaccgagtttctcgcggaccacggcgtgaaggtgcgctatctgcacagcgacatc
gacacggtcgagcgcgtcgaaatcatccgcgacctgcggcttggcacgttcgatgtgctg
gtcggcatcaacctgctgcgcgagggactcgatattcccgaagtgtcgctcgtcgccatt
ctcgacgcggacaaggaaggcttcctgcgcgccgagcgctcgctgatccagacgatcggc
cgcgcggcgcgtaacgtgaacggcaaggcgattctgtacgcggacaacgtcacggactcg
atgcgccgcgcgatcgacgaaaccgagcggcgtcgcgccaagcagatcgcgtacaacgcg
gagaggggcatcgtgccgcgcggcgtcgtcaagcggatcaaggacattatcgatggcgtc
tacaacgcggacgaagcgcgcaccgaactgcgcgagcagcaacagcgcgcgaagttcgag
gacatgtccgaaaagcagctcgccaaggaaatcaaacgcctcgaaaagcagatgatggat
tacgccaaaaatctcgaattcgaaaaggccgcgcaggcgcgcgatcaactcgcgctattg
cgccagcgcgtgttcggcgcgaacgtcggcgaccatctgacgggcaccgattga
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