KEGG   Paraburkholderia edwinii: KZJ38_08610
Entry
KZJ38_08610       CDS       T07588                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
pew  Paraburkholderia edwinii
Pathway
pew03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pew00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    KZJ38_08610 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pew03400]
    KZJ38_08610 (uvrB)
DNA repair and recombination proteins [BR:pew03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KZJ38_08610 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      KZJ38_08610 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII DEAD UVR AAA_30 Kinesin AAA_16 UB2H IlvC AAA_22 FlaG
Other DBs
NCBI-ProteinID: QYD70335
LinkDB
Position
1:1928584..1930677
AA seq 697 aa
MSEHHLSEVNDTLDESKFVSFEDSPFKLYQPYPPAGDQPTAIQTLVEGVEDGLSFQTLLG
VTGSGKTYTMANTIARLGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPE
AYVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMIL
TLRTGDRLGQREVIARLIAMQYTRNEADFQRGTFRVRGDTIDVFPAEHAEMAVRIELFDD
EIDTLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRETVMRAVETIKSELRERLEFFHSQGK
HVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGALPGEPPPTLVDYLPPDALMLLDE
SHVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFNEFEHKMRQVVFVSATPADY
EKKTAGQVAEQVVRPTGLVDPEIEVRPARSQVDDVLGEINERVKAGERVLVTVLTKRMAE
QLTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRAERSLIQTIGRAARNVNGKAILYADNVTDSMRRAIDETERRRAKQIAYNA
ERGIVPRGVVKRIKDIIDGVYNADEARTELREQQQRAKFEDMSEKQLAKEIKRLEKQMMD
YAKNLEFEKAAQARDQLALLRQRVFGANVGDHLTGTD
NT seq 2094 nt   +upstreamnt  +downstreamnt
atgtccgaacatcacctgagtgaagtcaacgacacgcttgacgaatccaaattcgtctcg
ttcgaagactcgccgtttaagctctatcagccgtatccgccggccggcgaccagccgacg
gcgatccagacgctcgtcgaaggcgtcgaggacgggttgtcgttccagacgctgctcggc
gtgaccggctccggcaagacctacacgatggcgaacaccatcgcgcgcctgggccgcccg
gccatcgtgttcgcgccgaacaagacgcttgccgcgcagctgtacgccgagtttcgcgag
ttctttccgcgcaatgcagtcgagtacttcgtgtcgtactacgactactaccagccggaa
gcgtatgtgccgcagcgcgacctgtttatcgagaaagactcgtcgatcaacgagcacatc
gaacagatgcgtctgtccgcaacgaagagcctgatggagcggcgcgatgtggtgatcgtc
gcgaccgtatcggcgatctacggtatcggtaatccgtccgaataccaccagatgattctt
acgctgagaaccggcgatcggctggggcagcgcgaggtgatcgcgcggctgatcgccatg
cagtacacgcgcaacgaggccgatttccagcgcggcacattccgcgtgcgtggcgacacg
attgacgtgtttccggccgagcacgccgaaatggccgtgcgcatcgaactgttcgacgac
gaaatcgacacgctgcaactgttcgatccgctgacgggccgcgtgcgccagaagattccg
cgcttcaccgtttacccgtcttcgcactatgtgacgccgcgcgaaaccgtgatgcgcgcc
gtcgaaacgatcaagtccgaactgcgcgagcggctcgagttcttccattcgcaaggcaag
cacgtcgaagcgcagcgtctcgagcagcgcacgcgcttcgacctcgagatgctgcaggaa
ctcggcttctgcaaaggcatcgagaactactcgcggcatttctccggcgcgttgccgggc
gagcctccgccgacgctggtcgactatctgccgcctgatgcgctgatgctgctcgacgaa
tcgcacgtcctgatcggtcagttgaacggcatgtacaacggcgaccgcgcgcgcaaggaa
aacctcgtcgactacggttttcgcctgccttccgcgctcgataaccggccgctcaagttc
aacgaattcgagcacaagatgcgccaggtcgtgttcgtttccgcgacgcccgccgactac
gagaagaagaccgccggccaggtggcggagcaggtcgtgcgaccgacgggcctcgtcgat
cccgagatcgaagtgcgtccggcgcgcagccaggtcgacgatgtgctcggcgaaatcaac
gagcgtgtgaaagccggcgaacgtgtgcttgtcacggtgctgacgaagcgtatggctgag
cagctgaccgagtttctcgcggaccacggcgtgaaggtgcgctatctgcacagcgacatc
gacacggtcgagcgcgtcgaaatcatccgcgacctgcggcttggcacgttcgatgtgctg
gtcggcatcaacctgctgcgcgagggactcgatattcccgaagtgtcgctcgtcgccatt
ctcgacgcggacaaggaaggcttcctgcgcgccgagcgctcgctgatccagacgatcggc
cgcgcggcgcgtaacgtgaacggcaaggcgattctgtacgcggacaacgtcacggactcg
atgcgccgcgcgatcgacgaaaccgagcggcgtcgcgccaagcagatcgcgtacaacgcg
gagaggggcatcgtgccgcgcggcgtcgtcaagcggatcaaggacattatcgatggcgtc
tacaacgcggacgaagcgcgcaccgaactgcgcgagcagcaacagcgcgcgaagttcgag
gacatgtccgaaaagcagctcgccaaggaaatcaaacgcctcgaaaagcagatgatggat
tacgccaaaaatctcgaattcgaaaaggccgcgcaggcgcgcgatcaactcgcgctattg
cgccagcgcgtgttcggcgcgaacgtcggcgaccatctgacgggcaccgattga

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