Paraburkholderia edwinii: KZJ38_16285
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Entry
KZJ38_16285 CDS
T07588
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pew
Paraburkholderia edwinii
Pathway
pew00521
Streptomycin biosynthesis
pew00523
Polyketide sugar unit biosynthesis
pew00541
O-Antigen nucleotide sugar biosynthesis
pew01100
Metabolic pathways
pew01110
Biosynthesis of secondary metabolites
pew01250
Biosynthesis of nucleotide sugars
Module
pew_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
KZJ38_16285 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KZJ38_16285 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KZJ38_16285 (rfbC)
Enzymes [BR:
pew01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
KZJ38_16285 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QYD67866
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All DBs
Position
1:complement(3689148..3689699)
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AA seq
183 aa
AA seq
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MAITVTATALPEVKLIEPKVFGDARGFFLESFNEREFVEKVGVEARFVQDNHSRSAKGVL
RGMHYQIEHAQGKLVRVVAGEVFDVVVDMRKRSPNFGKWMGLHLSAENHRQLWVPAGFAH
GFLVLSETADFLYKTTDYWYPEHERCLRWNDPGVGIQWPIEGEPVMAEKDKAGKSLSEAD
LYA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggcaattacggtgacggcgactgcgctgcctgaggtcaagctcatcgagccgaaggtg
ttcggtgacgcgcgcgggttttttctcgaaagtttcaatgagcgcgagtttgtggagaag
gtgggcgtcgaggcccgctttgttcaggacaaccactcgcgctcggcgaaaggcgtgctg
cgcggcatgcactatcagatcgagcatgcgcagggaaagctggtgcgcgtagtggcgggc
gaagtgttcgatgttgtcgtcgatatgcgcaaacgttcgccgaatttcggcaagtggatg
ggcctgcatctgagtgcggagaaccatcggcagttgtgggtgccggccgggtttgcgcat
gggtttctggtgctgtcggagacggcggactttctctacaagacgaccgattattggtat
cccgaacatgagcggtgcttgcgctggaatgatccgggtgtgggaattcaatggccgatc
gaaggcgagccggtgatggcggagaaggataaggccggcaagagcctgagcgaagcggat
ctgtacgcctga
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