Paraburkholderia edwinii: KZJ38_25840
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Entry
KZJ38_25840 CDS
T07588
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pew
Paraburkholderia edwinii
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pew03000
]
KZJ38_25840
Transcription factors [BR:
pew03000
]
Prokaryotic type
Helix-turn-helix
Other families
KZJ38_25840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
Mg_chelatase
HTH_23
AAA_5
AAA_2
HTH_7
HTH_30
HTH_29
AAA_3
HTH_22
HTH_38
HTH_AraC
HTH_50
HTH_Tnp_ISL3
HTH_Tnp_1_2
HTH_26
MCM
HTH_11
HTH_20
Mga
HTH_17
TrmB
Motif
Other DBs
NCBI-ProteinID:
QYD73093
LinkDB
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Position
2:complement(919248..921338)
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AA seq
696 aa
AA seq
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MSSLADINSHVRDVLNTVHNQSPTRQTSDSVAQSWTRCLNEFGLDPGRFIMPPVLTQHEL
AARREAASDLIACSKLEMTTLYQQLADPSLAVVLTDADGVIVHQVSSVPFGEAVAADGLR
VGAVWSERTAGTNGMGTCLAERECLAVYQHEHFYPRYTSLTCSAAPIFDDRGTVAGVLDV
TSRSRLLQQHSLVLVGMSRQMIENRLIDSRYRRANMIHFHSRPEFVGTLHAGKLAVDDEG
IVLAASRSALFQLDLRSPDQLCGKRIEEAFNASLEDMIARSIRGSFHPVTVYGAHTNNRF
FLVAQTPRDATTFASAFSTLPAPGAAAASSDAPPRGRTSVAKAKEARAPASGRLDKLSQL
EFGDPRMASQIQLAARAIQRKIPIILRGQTGTGKEVFANALHSISPNSGGSFVAVNCASL
PENLIESELFGYRAGAFTGAQREGRRGKIVQANNGTLFLDEIGDMPMTLQARLLRVLEEH
EVTPLGTETTLKVDFQLISASHRNLLDLVQRGMFREDLYYRLSGIEINLPALHERADIGA
LIQHLLDSEADDAPPLSAEARQALLNYAWPGNIRQLRHVLQMAIALCDGPEIRCAHLPPE
ITQGNVASATIAARAAAQSAPSSMNDMLALPDDCDVSSLNAIQIKERETVLAMLDEHRWN
VSNVAKTLGISRNTLYRKMHRLFIRLSHDTPPLNDA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgctcgctgacatcaactcgcatgtccgtgatgttttgaacacggtccacaac
cagtcgcccactcgacagacgagcgactcggtcgcgcagtcgtggacgcgttgcctgaac
gagttcggtctcgacccgggccgcttcatcatgccgcccgtgctcacacagcatgaactg
gccgcgcgccgcgaagccgcgagcgatctgatcgcatgctcgaagctcgaaatgaccacg
ctgtatcagcaactcgccgacccgagcctcgcggtcgtgctgaccgatgcggacggcgtg
atcgtgcatcaggtgtcgtcggtgccgttcggcgaagcagtcgccgcggatggcctgcgc
gtcggcgccgtgtggagcgagcgcactgcgggcacgaacggcatgggcacctgccttgcc
gaacgcgaatgcctcgcggtctatcagcatgaacacttctatccgcgctatacgtcgctc
acctgctcggccgcgccgattttcgacgaccgcggcacggtggccggtgtgctcgacgtg
acgagccgatcgaggctgttgcaacagcattcgctcgtgctagtcggcatgtcgcggcag
atgatcgagaaccggctgatcgattcgcgctaccggcgcgccaacatgattcattttcat
agccggcccgaattcgtcggcacgctgcacgcgggcaagctcgctgtagacgacgaagga
atcgtgcttgcagcgagccgcagcgcactgttccagctcgatctgcgctcgcccgaccag
ttatgcgggaaacgcattgaagaggcgttcaacgccagcctcgaagatatgatcgcgcgc
agcattcgcggctcgttccatccggtgacggtctacggcgcgcatacgaacaatcgcttc
ttcctcgtcgcgcaaacgccgcgcgacgcgacgacgttcgcgagtgcgttctcgacgttg
ccggcgccgggtgccgcggcagccagcagcgatgctccgccgcgcggccgcacctccgtt
gctaaagcgaaggaagcgcgtgcgccggcaagcggacgcctcgacaagctgtcgcaactc
gaattcggcgatccgcgcatggcctcgcagatacagcttgccgcgcgcgcgattcaacgc
aagatcccgattatcctgcgtggccagaccggtaccggcaaggaagtattcgcgaatgcg
ctgcacagcatcagcccgaatagcggcggcagctttgtcgcggtgaattgcgcgtcgtta
ccggagaacctgatcgagagcgaactgttcggctaccgcgcgggcgcgtttacgggcgcg
caacgtgaaggacggcgcggcaagatcgtgcaggcgaataacggcacgctgtttctcgac
gaaatcggcgatatgccgatgacgctgcaagcgcgcctgttgcgcgtgctcgaagaacac
gaggtcacgccgctcggcacggagactacattaaaggtggatttccagctgatcagcgcg
agccaccgcaatctgctcgatctcgtgcagcgtggcatgttccgcgaagacttgtattac
cggctaagcggcatcgagattaatctgccggcgctgcacgaacgcgcggatatcggcgca
ttgatccagcatctgctcgatagcgaagccgacgatgcaccgccgctaagcgccgaagcg
cgccaggcgttgctcaactatgcgtggcccgggaatattcgccagttgcgtcacgtgttg
caaatggcgattgcgctatgcgacggaccggagattcgctgcgcgcatttgccgcctgaa
atcacgcaaggcaacgttgcgtccgcaaccattgccgcgcgcgccgccgcacaatctgcg
ccgtcgtcgatgaacgacatgctcgcgctgccggacgactgcgacgtgtcgagcctgaac
gcgatacagatcaaggagcgcgaaacggtgctcgcgatgctcgacgaacaccgctggaat
gtcagtaatgtcgcgaagacgctcggcatcagccgcaacacgttgtaccggaagatgcac
agactgtttatccggctctcgcacgacacgccgccgcttaacgatgcgtga
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