Pedobacter endophyticus: IZT61_00065
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Entry
IZT61_00065 CDS
T07452
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pex
Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pex02000
]
IZT61_00065
Transporters [BR:
pex02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IZT61_00065
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_10
TPR_12
TPR_2
Motif
Other DBs
NCBI-ProteinID:
QPH39716
UniProt:
A0A7S9L058
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All DBs
Position
13708..15069
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AA seq
453 aa
AA seq
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MKIYLFKGIQLIVFCLILSGCDRYLDIPVKGKLVLTTTAHYDQWLNNDELYMGNPKCNYL
GDNIDIVEVRNPPMAENQLIYTWAPQFNFDEEAAPAFWGSHYAKINLFNTVLTGIDRATG
GTPSQKRSLKAEALLGRAFEYLYLVNEYGKPYNAATANQDLAVPFLTSGDVTQIVPPRST
VAEIYKHIIDDITMAIPDLPKDNSANRFRGSTAAGYSVLARAYLYTGNYPEAQKNAELAL
ASTRAVMMDYNDGFPKTSFISIHPDIIYARSIAANGVPMTLDFMRSFAQNDLRVKRFYIS
ADNYKFTTRGATSYLPARVHPTLGTTNSGPYYQEMKLIAAECAARANNLTVALKHLDDVR
KNRFAKATYVPFQSTDQEATLQEILKERRHELPLNELRWFDMRRLSQENRMQTVTRYDAK
EVAVATLEPNSVRYTLQVPLQVINFNPNMQQNP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatatctatttaaaggtattcagcttatcgttttctgcctgattttgtcaggt
tgtgatcgttatctggatatccccgtcaaaggcaagctggtgcttactaccaccgcccat
tacgaccaatggttaaataatgatgaactttatatgggcaatccaaagtgtaattatctg
ggtgataatatagacatcgttgaggtcagaaatcctcctatggccgaaaatcaactgatt
tacacctgggcgcctcagtttaactttgatgaagaagcagcccccgcgttttggggtagc
cattatgcgaagatcaatttgtttaatacggttttaacagggatagatcgggctactggc
ggtacaccttctcaaaaacggagccttaaagcagaagcattgctaggcagggcatttgag
tacttatatctggtaaatgagtacggaaagccttataacgcagctactgcaaatcaggat
ttggcagtacctttcttaacttcgggcgatgttacgcaaatcgttccaccaagaagcacc
gtcgccgaaatctataagcatattattgacgacatcacaatggctatacccgacttgcca
aaagacaacagcgccaaccgcttcagaggatctaccgcggccggatatagcgtgctggcg
agggcctatttgtataccggcaattatccggaggcgcaaaaaaatgcagaacttgcttta
gcatcaacgcgtgccgtgatgatggattataatgatggttttccgaaaacaagtttcatc
agtattcatcccgatatcatctatgcccggtcaattgctgccaacggagttcctatgaca
ttggattttatgcgttcatttgcacaaaatgacctccgtgttaaaagattttatattagt
gcggataactacaaattcacaacaaggggcgcaaccagttatttacctgcacgagtacat
cctacattgggtaccaccaatagcggcccttattaccaggaaatgaagcttattgcggct
gaatgtgcggcacgcgccaacaatttaacagtagcccttaagcacctggatgacgttcgt
aaaaaccggtttgccaaagctacgtatgtaccttttcaatctaccgatcaggaagccacc
ttgcaggaaatactgaaagaaaggcgccatgaactcccgctaaatgaattgcgctggttt
gatatgagacgtttaagtcaggaaaacaggatgcaaacagtaacccggtatgatgcaaag
gaggttgccgttgctacgctcgagcccaacagtgtgcgctatactttgcaggttcctttg
caggtaatcaacttcaaccccaatatgcagcagaacccttaa
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