Pedobacter endophyticus: IZT61_01085
Help
Entry
IZT61_01085 CDS
T07452
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pex
Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pex03009
]
IZT61_01085
Enzymes [BR:
pex01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
IZT61_01085
Ribosome biogenesis [BR:
pex03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IZT61_01085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QPH39911
UniProt:
A0A7S9L0H9
LinkDB
All DBs
Position
242171..242893
Genome browser
AA seq
240 aa
AA seq
DB search
MKYPNFKDLILFENNDFIVINKPPFLASLDERGGNGETNVLRLAKQYSHDAQVCHRLDKE
TSGALIIAKNPEGYRHASMQFERRKVNKTYHAVVDGHVIFDKLLVDLPILNDGNKNVTID
RAEGKRAETVFDSLKYYKHYTLVECKPITGRMHQIRIHLATQRAAIVGDEMYRGKPVFLS
SIKRGYKLTKGEEEQPIMKRFALHAKHLVFKGLDDQEIVIDAPYPKDFATLIKLLDKFDA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtacccaaattttaaagaccttattcttttcgaaaacaatgatttcattgtaatt
aataaaccgccttttttagcctcgcttgatgaaagaggtgggaatggagaaacgaacgtt
ttgcgcctggctaaacaatacagccacgatgctcaggtttgccaccgtttagataaggaa
acttcgggcgctttaattattgcgaaaaatcccgaaggttatcgccatgcttcaatgcag
ttcgaacgtagaaaggttaataaaacctaccacgccgttgttgacggacacgtaatcttc
gataaattattggttgatttgcctattttaaacgatggaaacaaaaatgtaaccatcgat
cgggctgagggcaaaagggctgaaacagttttcgattcccttaaatattataagcattat
actttggttgaatgcaagcctattacgggcagaatgcaccaaattcgcattcaccttgct
acacagcgtgcggcgattgttggcgatgaaatgtacagagggaagcctgtttttctatcc
tcaattaaacggggttataagttaaccaagggcgaagaagaacagccgattatgaaacgc
tttgcactgcatgccaaacacctcgtgtttaagggactggatgatcaagaaattgtaatt
gatgcgccttatccgaaagactttgcaacactcatcaagcttttagataaattcgacgct
taa
DBGET
integrated database retrieval system
