Pedobacter endophyticus: IZT61_11825
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Entry
IZT61_11825 CDS
T07452
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pex
Pedobacter endophyticus
Pathway
pex00521
Streptomycin biosynthesis
pex00523
Polyketide sugar unit biosynthesis
pex00541
O-Antigen nucleotide sugar biosynthesis
pex01100
Metabolic pathways
pex01110
Biosynthesis of secondary metabolites
pex01250
Biosynthesis of nucleotide sugars
Module
pex_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
IZT61_11825 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IZT61_11825 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IZT61_11825 (rfbC)
Enzymes [BR:
pex01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
IZT61_11825 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QPH37801
UniProt:
A0A7U3Q3E4
LinkDB
All DBs
Position
complement(2915002..2915550)
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AA seq
182 aa
AA seq
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MEIEQTGLKDCLIIKPRVFEDPRGYFFESFNKDSFEEKTGMSGDFVQDNQSFSSYGVIRG
LHAQTGAFAQAKLVRVTKGEVLDVAVDARPGSPTYGKHISVRLSAENKLQLYIPRGFVHG
FSVLSETAEFLYKCDNFFNKASETGVIYNDVDLNIDWLIPEDKRSVSDKDLLLKPFAELQ
HD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgaacaaaccggtttaaaagattgtctgattattaagccgcgggtatttgaa
gacccaagaggttatttttttgaaagctttaacaaagacagcttcgaagaaaaaacggga
atgtctggcgatttcgttcaagataaccaatcattctcctcttatggtgtaattagaggc
ctgcacgcccaaactggcgcttttgctcaagccaagttggttcgcgtaaccaaaggcgag
gttttggatgttgcagttgatgctcggccaggatcgccaacatacggtaaacacatctcg
gttcggttaagcgccgaaaacaagctccagctatatattccacgaggatttgtacacggc
ttttcggtattaagtgaaactgccgaatttttatacaaatgcgataatttcttcaacaaa
gcctcagaaaccggcgtaatttataacgacgtagatttaaatatcgactggttgattccg
gaagataaacggtcggtatctgacaaagatttattgctaaaaccttttgctgaattacaa
catgattaa
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