Pedobacter endophyticus: IZT61_21780
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Entry
IZT61_21780 CDS
T07452
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pex
Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pex02000
]
IZT61_21780
Transporters [BR:
pex02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IZT61_21780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
QPH39634
UniProt:
A0A7S9KZU3
LinkDB
All DBs
Position
5338937..5340400
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AA seq
487 aa
AA seq
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MKKYLFIFISLIALSSCKKFLDIQPESEVSKEELFSTEEGFKEALNGAYVGFAGASLYGG
NLTFSNLDIMAQNYQFSSADYQRIAAFDYTLPSYVDKISVIWTNAYKQIGNVNQILEIID
QRKGIFKDQNYEIVKGEALALRAYMHFDLLRMFGTAYKSNPSFKAIPYVTTVSTKTTPYS
AVTEVIDKVIADLQEAKSLLKGTDPIIPASYVVGYPNGEKATELKSSNLFLQNRRHRMNY
FAVVGELARVYLYKGDQVNSLSSAKEVIDSQKFPWTVKEDFFNNDISKRDRIFYNEILFG
WFVPKSQDQLTGLFSRDNPDYSATADQINSIYNLGTVGADDWRYKQWFRLVKASGTADRF
YLQKYVVNSSPIANLHPLVAPALRLSEMYLIAAEASFDTNPSTAVEYFNTLRIHRGIGAN
VDATVAKNDFITLLEGEYRKEFYGESQNFFMHKRLNLGIITTVGLIYPPSDKIFVFPLPV
DEQAYRN
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatacttatttatattcatcagcctgatcgctttatcttcctgtaagaagttt
ttggatatccagcccgaatcggaggtatccaaagaagagctgtttagcacagaagaaggt
tttaaagaagcgctgaatggtgcttatgtgggctttgccggggcgagcctttacggtgga
aacctcacctttagcaacctcgatatcatggcgcaaaactaccagtttagcagtgccgat
tatcagcgcattgccgcttttgattataccttgcccagttatgtggacaagatcagtgtg
atctggaccaacgcttacaaacaaattggcaacgtaaaccaaattttggagataattgat
caacgaaaaggaatttttaaagatcagaattacgaaatcgtaaaaggggaggcgctggcc
ttaagggcttacatgcatttcgatcttctccgtatgttcggaaccgcttataaaagcaat
cccagttttaaggctattccctacgtaaccacggtaagtaccaaaaccacgccgtattct
gccgtgactgaggtaattgataaagtaattgccgacctgcaggaagcaaaaagtttgtta
aagggcacagacccgattataccggcaagctatgtggtaggttatcccaatggcgaaaag
gccactgagttaaaaagctcgaatttgtttttacagaacagaaggcaccgcatgaactat
ttcgctgtggtgggcgaactggcaagggtttacttatacaaaggcgaccaggtaaatagc
ttgagtagcgccaaagaagtcatcgattcgcaaaaattcccatggacggttaaagaagat
tttttcaacaacgacatctcaaaacgcgatcgtattttttataacgaaattttgttcggg
tggtttgtgccaaagtcgcaagatcagttaaccgggctcttttcgagggataatcccgat
tattcggccactgccgatcaaattaattcaatttacaatttgggtacggtaggtgcggac
gattggcgctataagcaatggttcagactggtaaaggccagcggaacggccgatcgtttt
tacctgcaaaaatacgtggtaaactcttcgccaattgccaatttgcatcccctggttgca
ccagcattgcgcctgagcgaaatgtacctgattgccgccgaagccagttttgataccaac
cccagtaccgcggttgagtattttaacacacttcggatacatcgcggtattggtgcgaac
gttgatgccacggttgctaaaaacgattttatcaccttacttgaaggcgagtatcggaag
gagttttatggcgaaagccagaatttctttatgcacaagcgccttaacctgggcattatt
accactgtgggattgatttatccaccttcggataaaatatttgttttcccgcttcctgtt
gatgagcaagcttacagaaactaa
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