Plasmodium falciparum 3D7: PF3D7_0110800
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Entry
PF3D7_0110800 CDS
T00095
Name
(RefSeq) transcription initiation factor TFIIB, putative
KO
K03124
transcription initiation factor TFIIB
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PF3D7_0110800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfa03021
]
PF3D7_0110800
Transcription machinery [BR:
pfa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
PF3D7_0110800
Prokaryotic type
Archaeal type
TFB
PF3D7_0110800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
DUF1289
zf-C2HC5
Motif
Other DBs
NCBI-GeneID:
813242
NCBI-ProteinID:
XP_001351037
PlasmoDB:
PF3D7_0110800
UniProt:
Q8I237
LinkDB
All DBs
Position
1:join(417921..417993,418380..418837,419035..419607)
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AA seq
367 aa
AA seq
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MSSISPNKKFALTSASDKPITLIRTNVSNENNNVRRKMLRNFRNSRNTTCPDCKEKGIII
CDTSEGTQICNGCGMVVESKILSEEQEWRNFQNDGQSKNTDRNRVGEVSDIWLENNLTST
TFIKSSKKLQHLNMMTQINKNDQTLISAFNILKLICDTFFLRSNVIERAKEITKELQDME
QLKNRINNLNMLAVVYLACREAGHIKSIKELITFDRSYKEKDLGKTINKLKKVLPSRAFV
YNENISHLIYSLSNRLQLSIDLIEAIEYVVKKASTLITTSHRLNSLCGGSIHLIVELNTN
EEKNMKLPNLSQIATVCGVTTNTLKTTFKELLNAAEYIIPKYYLSEDNPKLSMLKQKYLS
EDKRKKN
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccatttctccaaataaaaagtttgctttaacctctgcgagtgataagcccatc
actttaattagaaccaatgtaagtaatgagaataataatgtgaggagaaagatgttaaga
aactttaggaatagtagaaatacgacatgcccagattgtaaagaaaaaggaataattatt
tgtgatacgagtgaaggtactcaaatatgtaatggatgtggtatggtcgttgaaagtaag
attttgtcagaagaacaagaatggagaaattttcaaaatgatggtcagtcaaaaaatact
gatagaaatagagtaggtgaagttagtgatatatggctagaaaataatttaactagtact
acatttattaaatctagtaaaaaattacaacatttaaatatgatgacacaaataaataaa
aatgatcaaacattaatttccgcatttaatatcttaaaattaatttgtgataccttcttt
ttgaggagtaatgttattgagagagccaaggaaataacaaaggagttgcaggatatggaa
caacttaagaaccgcataaacaacctgaacatgctagccgtcgtatatttagcatgcaga
gaagcaggtcatataaaaagtataaaagaattaattacatttgatagatcatataaagaa
aaggatttaggaaagacaataaataaattaaaaaaagtacttccatcacgagcttttgta
tataatgaaaatatatctcatttaatatattctttatcgaatagattacagctatccatt
gatttaatcgaagcaatagaatatgtagttaaaaaagcaagtacattaattacaacatct
cataggttaaattctctttgtggaggatccatacatttaatagttgaattaaatacgaac
gaagaaaaaaatatgaaattaccaaacttatcacaaatagcaaccgtatgtggtgttaca
actaatacattaaaaacaacattcaaagaattattaaatgctgcagaatatataatccct
aaatattacctttccgaagataatcctaaattatccatgcttaagcaaaaatatcttagt
gaagacaaaaggaaaaaaaactaa
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