KEGG   Plasmodium falciparum 3D7: PF3D7_1304100
Entry
PF3D7_1304100     CDS       T00095                                 
Name
(RefSeq) DNA ligase I
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pfa  Plasmodium falciparum 3D7
Pathway
pfa03030  DNA replication
pfa03410  Base excision repair
pfa03420  Nucleotide excision repair
pfa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PF3D7_1304100
   03410 Base excision repair
    PF3D7_1304100
   03420 Nucleotide excision repair
    PF3D7_1304100
   03430 Mismatch repair
    PF3D7_1304100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfa03032]
    PF3D7_1304100
   03400 DNA repair and recombination proteins [BR:pfa03400]
    PF3D7_1304100
Enzymes [BR:pfa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PF3D7_1304100
    6.5.1.6  DNA ligase (ATP or NAD+)
     PF3D7_1304100
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     PF3D7_1304100
DNA replication proteins [BR:pfa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PF3D7_1304100
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PF3D7_1304100
DNA repair and recombination proteins [BR:pfa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PF3D7_1304100
   NER (nucleotide excision repair)
    Other NER factors
     PF3D7_1304100
   MMR (mismatch excision repair)
    Other MMR factors
     PF3D7_1304100
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C ICE2
Other DBs
NCBI-GeneID: 813777
NCBI-ProteinID: XP_001349768
PlasmoDB: PF3D7_1304100
UniProt: Q8IES4
LinkDB
Position
13:complement(join(221816..224357,224524..224720))
AA seq 912 aa
MNFLILVVLIKMVVCKIINYVRSDYNFMLSFLRTRKIFSHKKIYFNFKVSKNITKNSSSN
SYSDILKCFSFPRKGTNDKTKENETFEKGEVKEEEEEKDKNVKRKIINESSKNKRAKVKN
ENDVIKKGSLFNCVVREDEKVNDLSSPKFNPVHFNINDLYLSEKDKEKHKFKDSLLFTFL
TNAFNQIEELKGSGTGSKKNVSIILSNIFRVLIYYSPNDLIPAVYITLNKVAPDYLNVEA
GVGEALILKTMSEAYSRTESSIKKDLQQIEDLGIIAENCSCKMRTIFPLPRLTIQSVFHE
LKSIPNLIGSNSQQKKREVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVVQALSYAF
ILTRPSIPDDIIKRGKEINENLINGKLDGTNNLINKSNNKTEEWLTQSGDRNCIKEENLN
DELLSKDDINKCENMDSLINEIRIRNEKINKPNIFYNLIEKVGDTRLLPLFFKELKNIYC
EENNDIDIFECMEKSVKSALCELPNIEIIIQNLLNGDDMNTLSKKCTVKTGIPVQPMLAK
PTKGVQEVLDRFNNVTFTCEYKYDGERAQIHYIDKDNIKIFSRNLETMTEKYPDVIQIIK
DQIGENVKECIIDSEVVAYDIVNNKILPFQVLTTRKRKDVDIENIKVKVCLFPFDLICCN
GIPVIKEPLAVRRKLLYSLLKSKDGVLSYATHSEMNNIEDIDMFLQDAIENNCEGLMVKT
LVENASYEPSRRSLNWLKVKKDYVEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLAAYNSE
TENFQTVCKAGTGFSDEILSTLYETLSEKIIPNKKSYYEVSDKLNPDVWFDAHYVWEVKA
ADLSLSPVHTAAIGIYADDKGIGLRFPRFLRLREDKNAEQATTTQQIVDFYEAQFSSNKN
KNIDYNDDTESE
NT seq 2739 nt   +upstreamnt  +downstreamnt
atgaatttcctaatattagttgtattaattaagatggttgtatgtaaaattattaattat
gttagaagtgattataattttatgctgtcatttttaaggacgagaaaaatatttagtcat
aaaaagatttatttcaattttaaagtttctaagaatattacaaagaattcatcatctaat
agttatagtgatatattaaaatgtttctcttttccaagaaaaggaactaacgataagacg
aaggaaaatgaaacatttgaaaaaggagaagtaaaagaagaagaagaagaaaaagataaa
aacgtcaaaaggaaaattattaatgaaagtagtaaaaataaaagagctaaagttaagaat
gaaaatgatgttataaaaaaagggtcgttatttaattgtgttgtaagagaagatgaaaaa
gtgaatgatttgagctcacctaaatttaatcctgtacattttaatataaatgatttatat
ttatctgaaaaagataaagaaaaacataaatttaaagactccttattatttaccttttta
acaaatgcatttaatcaaatagaagaattaaaaggtagtggtacaggaagtaaaaaaaat
gtatctattatattatcgaatatatttagggttttaatatattatagccctaatgactta
ataccagctgtatatataaccttaaataaagtagctcccgattatttaaatgtcgaagct
ggtgtaggtgaagccttgatattaaaaacgatgtctgaagcatatagtagaacggaaagt
agtataaagaaggatttacaacaaattgaagatttaggaataatagcggagaattgttct
tgtaaaatgagaacaatatttccgttacctcgcttaactatacaatctgtttttcatgag
ctaaaaagtatacctaaccttataggatcaaattcacaacagaagaaaagggaagtcata
aagaaattgttagtaagtgctaaaacatctgaagctaaatatattgtaagatttttacaa
cagcgtttaaggataggtgtaaattctgcaacggtcgtacaagctttgtcatatgccttt
atattaacaagacctagtatacctgatgatattataaaaagagggaaagaaattaatgag
aatttgattaatggtaaattggatggtactaataatttaattaataaatctaataacaag
acggaagagtggctaacccaatcaggtgataggaattgtataaaggaagaaaatttaaat
gatgaattattatcaaaggatgatataaataaatgtgaaaacatggattcattaattaat
gagatacgtattcgaaatgaaaaaataaacaaaccgaatattttttataaccttattgaa
aaggtgggtgacacacgattattaccattattttttaaagaattaaaaaatatatattgt
gaagaaaataatgatattgatatatttgaatgtatggaaaaatcagttaagagtgcttta
tgtgaattacccaatatcgaaataataatacaaaatttattaaatggtgatgatatgaat
accttaagtaaaaaatgtactgttaaaacaggtattcccgttcaacctatgttagcaaaa
ccaactaagggtgttcaagaagtgttggatagatttaataatgttacatttacttgtgaa
tataaatatgatggtgaacgagcacaaatacattatatagataaagataatataaaaata
ttcagtcgaaatttagaaacgatgactgaaaaatatccagatgttatacaaataataaag
gatcaaataggagagaatgtaaaggaatgtattatagatagtgaagttgttgcttatgat
atagttaataataaaatattaccattccaagtcttaactactagaaaaagaaaagatgta
gatatagaaaatattaaagtgaaagtatgtctttttccatttgatttaatatgttgtaat
ggtataccagtaattaaagaacctttagctgttagaaggaaattattatattctttatta
aagtcaaaagatggggtgttatcatatgctacccattctgaaatgaataatattgaagat
attgatatgttcttacaagatgctatcgaaaataattgtgaaggtttaatggttaagact
ttagtagaaaatgcatcctatgaaccttctaggagatcattaaattggttaaaggtcaag
aaagattatgttgaaggtctttcagattcggttgatttagttccgatagctggttattat
gggaaaggaaaaagaagtggagtatatggagcttttgttttagcagcttataattctgaa
acggaaaattttcaaaccgtttgtaaggcaggtacaggttttagtgatgagatattaagt
acattatatgaaacattaagtgaaaaaattataccaaataaaaaatcgtattacgaagta
tctgacaaattaaatcctgatgtgtggtttgatgctcactatgtatgggaggttaaggca
gcagatttatctttgtcacctgtacatacagcagctattggtatatatgcagatgataaa
ggtattggtttaaggtttcctcgatttttacgtttaagagaagataaaaatgcagaacaa
gcaaccactacacaacaaattgtagatttttatgaggcacaatttagtagtaataaaaat
aaaaatattgattataatgatgatactgaaagtgaataa

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