Phascolarctobacterium faecium: PFJ30894_00302
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Entry
PFJ30894_00302 CDS
T05784
Symbol
gabR
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pfac
Phascolarctobacterium faecium
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfac03000
]
PFJ30894_00302 (gabR)
Transcription factors [BR:
pfac03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PFJ30894_00302 (gabR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_36
HTH_41
MarR_2
HTH_24
Fe_dep_repress
HTH_11
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
BBG62688
LinkDB
All DBs
Position
318593..319939
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AA seq
448 aa
AA seq
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MLLTNLKLDKQTDTPLYTQIIDSIKNQLYNDQIAAGDRLPSVRRLSAALQISRTTVENAY
NQLVADGYLQNEPKRGYFAAALSGLRKHSDAPVTQSIEPPAVRYNFANNYIDPASFPSEL
WRRYLNRALKNKHLLSGYGEPQGETELRRTLAKYSSVARGVICSPEQIVIGAGVQSLLQI
LIDILQPDITSIALEAPGFAQAERLFTSHGWQVRHFSTDQLETSLPRLLYVSPSNPYKGR
SLSPQQRLNLLRWATQQQTYLLEDDYNGEFRYFGRPVSSLQGMSDGRTVIYLGSFSRLLL
PSLRISYMVLPPLLLDRYRQLGHLYNQTSSTIEQLALADFIAAGALRRHVKRLRRLYSNK
NTLLRQALTEIFGSRVIVRAYESGLHLRLAVVTQQTADTLSELALENGVRILPVYDSNGN
LPEILISFVGIQENDIRPALLQLKKAWF
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgactaatcttaaacttgacaaacagaccgacacgcctttatatacccagatc
attgactctatcaaaaaccagctctacaatgaccagatcgcagccggcgacagacttccg
tctgtacgcaggctctcagcagcgctgcagataagccgcacgactgtcgaaaacgcttac
aatcagctggttgccgacggttatctgcaaaacgaacctaagcgcggttattttgcagca
gcactgtcaggcctgagaaagcacagcgacgcgcctgtgacacaaagtatcgaaccgcct
gccgtacgttataactttgccaataattatatcgatcccgcttcttttccctccgagctt
tggcggcgctatctgaaccgtgccttaaaaaataaacacctgctttccggctatggcgag
ccgcagggtgaaacagaactgcgccgtacactggccaaatacagctcggtggcccgcggc
gttatctgcagccccgaacagatcgtgatcggcgccggtgtgcaaagcctgctgcagatc
ctgatcgacattctacagccagatatcaccagtattgctctggaagcgccaggctttgcc
caggcagagcggctttttacttcgcatggctggcaggtacggcatttcagcaccgaccag
ttagagacttccctgcccaggctgctttacgtcagcccttccaatccctataaaggccgc
tcgctctcgccgcagcaaagactgaacctgctgcgctgggcaacgcagcagcagacctat
ctgctggaagatgactataacggcgagttccgttatttcggacggccggtatcctcactg
cagggcatgagtgatggccgtacagttatctatcttggttctttttcgcggctgctgctg
ccttccctgcgtatttcttacatggtattgccgccgctgctgttagaccgttaccgccag
ctgggacacctttataaccaaacgtcttctacgatcgaacagctggcactggccgacttt
attgccgccggcgcactgcgccgccacgttaaacgactgcgcaggctctacagtaataaa
aacacactgctgcggcaagctttaacggaaatcttcggcagcagagtcattgtacgagcc
tatgaatccggtctgcatctgcgcctggctgtcgtcacgcagcaaactgccgataccctg
tccgaactggcactggaaaacggcgtccggatcctgccggtttacgacagcaacggtaat
ttaccagagatcctgatttcttttgtcggtattcaggaaaacgacatccgaccggcactg
ctgcaattaaaaaaagcatggttttag
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