Pseudomonas fakonensis: KSS94_02035
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Entry
KSS94_02035 CDS
T07698
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KSS94_02035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfak03021
]
KSS94_02035
Transcription machinery [BR:
pfak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KSS94_02035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
HTH_17
MerR
HTH_24
HTH_11
Sigma70_r3
HTH_29
Phage_terminase
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QXH51950
LinkDB
All DBs
Position
complement(477529..478047)
Genome browser
AA seq
172 aa
AA seq
DB search
MTPAHSPHADLVGALYRDHRSWLLAWLQRSTACRQRAEDLSQDTFVRLLGRERLDAPREP
RAFLVAVAKGLLFDHFRRAALEQAYLNELALLPEAEHPSPELQHLILEDLKAIDRLLGKL
SSKARAAFLHNRLDAMGHAEIAERLGVSVSRVRQYIAQGMRQCYIALYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgacccccgcacacagtccacatgccgatctggtcggagcgctgtaccgcgaccaccgc
agctggctgctggcctggctgcagcgcagtaccgcctgccgccaacgtgccgaggacctg
agccaggacactttcgtgcgcctgctcggccgtgagcgcctggacgccccccgcgaaccc
cgcgcgttcctggtcgccgtggccaagggcctgctgttcgatcactttcgccgcgccgcc
ctcgagcaggcctacctgaacgagctggccctgctgcccgaagccgaacacccctcgccc
gagctgcaacacctgatcctcgaagacctcaaggccatcgaccgcctgctcggcaagctg
tcgagcaaggcccgcgccgccttcctgcacaaccgcctggacgccatgggccacgccgaa
atcgccgagcgcctgggggtgtcggtatcgcgggtacgccagtacatcgcccaaggcatg
cgccagtgctacatcgccctgtacggagagccgacatga
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