Pseudomonas synxantha LBUM223: VO64_4534
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Entry
VO64_4534 CDS
T03769
Name
(GenBank) RND efflux system, inner membrane transporter CmeB
KO
K18138
multidrug efflux pump
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb01501
beta-Lactam resistance
pfb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VO64_4534
01503 Cationic antimicrobial peptide (CAMP) resistance
VO64_4534
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfb02000
]
VO64_4534
01504 Antimicrobial resistance genes [BR:
pfb01504
]
VO64_4534
Transporters [BR:
pfb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VO64_4534
Antimicrobial resistance genes [BR:
pfb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VO64_4534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AKA85080
LinkDB
All DBs
Position
complement(5069078..5072239)
Genome browser
AA seq
1053 aa
AA seq
DB search
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPAIAPTAIDIQVTYPGASAQTVQDT
VVQVIEQQLNGIDNLRYVASDSNSDGSMTITATFNQGTNPDIAQVQVQNKLNLATPLLPQ
EVQQQGIRVTKSVKNFLMVIGLVSEDGSMTKDDLSNYIVSNIQDPISRTSGVGDFQVFGS
QYAMRIWLDPAKLNNYQLTPVDVSNAIKAQNVQVATGQLGGLPALPGTQLNATIIGKTRL
QSAEEFAKILMKVNTDGSQVRLGDVARIELGGQNYSISAQFNGKPASGMAIKLAAGANAL
DTGKAIRETVKSLEPFFPPGMKAVVPYDTTPVVTESISGVVHTLVEAIVLVFLVMFLFLQ
NFRATIITTMTVPVVLLGTFGILAACGFTINTLTMFGMILAIGLLVDDAIVVVENVERVM
AEEHLSPKEATIKSMGQIQGALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSAMAL
SVMVALIFTPALCATMLKPIDPEKHGQPKRGFFGWFNRTFDSGVLKYERGVGGMIKHKIP
AFLVYVLILAGMIWMFTRIPSAFLPEEDQGVIFAQVQTPVGSSAERTQKVIDDMRAFLLH
DKEGEPGEGKSVNSVFTVNGFNFAGRGQSSGLAFVMLKPWDERDSTQSVFEVAKRAQGYF
FGAFKDAMVFAIVPPSVLELGNATGFDVFLQDQGGVGHDKLMAARNQFLGAAAQSKVLAG
VRPNGVNDEPQYELTVDDEKASAQGISLADIQQTLAIALGGSYINDFIDRGRVKKVYVQG
DAASRMAPEDLDKWYVRSDSGKMVPLSAISSGKWIFGSPKLSRYNGVAAMEILGTPAPGY
STGDAMAEVERIAKELPAGIGYSWTGLSYEERLSGSQAPALYALSLLVVFLCLAALYESW
SIPIAVILVVPLGVIGALIATSMRGLSNDVFFQVGLLVTVGLAAKNAILIVEFAKELHEQ
GKGIVEAAIEASRMRLRPIIMTSMAFVLGVLPLAISSGAGSGSQHAIGTGVIGGMITATV
LAIFWVPLFYATVSSAGERKKKDTTETPKEAGQ
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaattttttatcgaccgtcccatttttgcctgggtaatagccctggtgatcatg
ctggtcggggcactgtcgatcctgaagttgcccatcaaccaatacccggccattgcgcca
acggccattgatatccaggtgacctacccaggcgcgtccgcacaaaccgtgcaagacacc
gtggttcaggtcatcgagcaacagctcaacggtatcgacaacctgcgttatgtcgcctcg
gacagtaactccgacggcagcatgaccatcaccgcgacgttcaaccagggtaccaacccg
gatatcgcccaggtccaggtgcagaacaagctgaacctggccaccccgctgctgccgcaa
gaagttcagcaacagggtatccgcgtgaccaagtcggtgaagaacttcctgatggtaatc
ggtctggtgtcggaagacggcagcatgaccaaggacgacttgtccaactacatcgtgtcc
aacatccaggacccgatttcccgtacctcgggtgtaggtgacttccaggtcttcggttcg
cagtacgccatgcgtatctggctcgacccggccaagctgaacaactaccagctcaccccg
gtggatgtcagcaacgccatcaaggcgcagaacgtgcaggtggccaccggccaattgggc
ggcctgcctgccctgcccggtacccagctgaacgctaccattatcggcaagacgcgcctg
caaagcgctgaagagttcgccaagatcctgatgaaggtcaacaccgacggctcccaggtt
cgcctgggtgacgtcgcgcgtatcgagctgggcggccagaactacagcatcagtgcgcag
ttcaacggcaagccggcctcgggtatggccatcaagctggcggcaggtgccaacgcattg
gacaccggcaaggccatccgcgaaacagtgaagtccctggagccgttcttcccgccgggc
atgaaggcggtggtgccgtatgacaccaccccggtagtgaccgaatcgatctccggtgtg
gttcacaccctggtcgaagcgatcgtgctggtgttcctggtgatgttcctgttcctgcag
aacttccgcgccaccatcattaccaccatgaccgtaccagtggtattgctgggtaccttc
gggatcctggccgcatgcggcttcaccatcaacaccctgaccatgttcggcatgatcctg
gccatcggcttgctggtggacgatgccatcgtggtggtggaaaacgtcgaacgggtaatg
gccgaggaacatctgtcgcccaaagaagcgacgatcaagtccatgggccagatccagggc
gccctggtgggtattgctttggtactgtcggcggtactgctgccgatggcgttcttcggt
ggttccaccggggtgatctaccgccagttctccatcaccattgtttcggcgatggcgttg
tcggtcatggttgccctgatcttcaccccagccttgtgcgccaccatgctcaagccgatc
gatccggaaaagcacggccaacccaagcgcggcttcttcggctggttcaaccgcaccttc
gacagcggcgtactcaagtacgagcgcggcgtgggcggcatgatcaagcacaagatcccg
gcattcctggtgtatgtgctgatcctggccggcatgatctggatgttcacccgtatcccg
agcgcgttcctgcctgaggaagaccagggcgtgatctttgcccaggtgcagacaccggtc
ggctcttcggctgaacgtacgcaaaaagtcatcgatgacatgcgcgccttcctgctgcat
gacaaggaaggcgagccaggcgaaggcaagtcagtgaactcggtgtttaccgtaaacggc
ttcaacttcgccggccgtggccagagctcgggcctcgcgtttgtgatgctcaaaccatgg
gatgagcgtgactcgacccaatcggtgttcgaagtcgccaagcgggcccagggttacttc
ttcggagccttcaaggacgcaatggtattcgccatcgtgccaccttcggttcttgaattg
ggtaacgccaccggtttcgacgtgttcctgcaagaccagggtggcgtcggccacgacaag
ctgatggctgcacgtaaccagttcctcggtgcggcggcgcaaagcaaggtactggcaggt
gtacgtccaaacggcgtgaacgatgaaccacagtacgagctgaccgtcgacgacgagaaa
gccagcgcccagggcatcagcctcgccgatatccagcagaccctggccattgccctgggt
ggcagctacatcaacgacttcatcgaccgtggtcgtgtgaagaaggtgtatgtgcaaggt
gacgctgccagccgtatggcgccggaagacctggacaaatggtacgtgcgcagcgactcc
gggaagatggtgccgttgtcggccatttcgtcgggcaagtggatcttcggttcgccgaag
ctctcgcgatacaacggtgtagcggcgatggaaatcctcggtaccccggcgccgggctac
agtaccggtgacgcgatggcggaagtcgaacgcattgccaaggaactgccggccggcatc
ggctactcctggacaggcctgtcgtatgaagaacgcctgtccggctcccaggcacctgcg
ctgtacgcactgtcgctgctggttgtattcctgtgcctggcggcactgtacgaaagctgg
tcgatcccgattgcagtgattctggtggtgccactgggtgtgatcggtgcgctgatcgct
accagtatgcgtggcttgtccaacgacgtgttcttccaagtgggcttgttggtgacggtg
ggcctggcggcgaaaaacgccatcctgatcgtggaattcgccaaggagctgcatgagcaa
ggcaaaggcatcgtcgaggcggcgatcgaagcttcgcggatgcgtctgcgcccgatcatc
atgacgtccatggcgttcgtgctcggcgtactgccgctggcgatttccagtggcgcaggc
tcaggtagccaacacgcaatcggtaccggcgtaatcggcggtatgatcaccgccaccgtg
ctggcgatcttctgggtgccactgttctatgcaaccgtgtcctcggctggcgaacgcaaa
aagaaagacactactgaaactcctaaagaggctggccaatga
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