KEGG   Pseudomonas fluorescens A506: PflA506_2413
Entry
PflA506_2413      CDS       T02114                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator, Fis family
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
pfc  Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:pfc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pfc03000]
    PflA506_2413
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfc02044]
    PflA506_2413
Transcription factors [BR:pfc03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PflA506_2413
Secretion system [BR:pfc02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   PflA506_2413
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 HTH_30 GAF_2 AAA_2 AAA_16 HTH_50 HTH_28 AAA_7
Other DBs
NCBI-ProteinID: AFJ54782
LinkDB
Position
2629112..2630641
AA seq 509 aa
MTDNLPGGGADALRYADALSACFARLGFERDEHALPDGCVSTAARLSQSDVSQLYLLDEV
TGRLELIAQHLAQVSSLTVVPPRPGQHSQQLLHDALTQGTGLSLEDVQGSGHDTGFLPAL
ATPWRALLIVPLFNQCERITGVLVCARQQPAQLQGYAPSLGHLGSYAVNRLRVLRGRQPN
VGPKPAGHKPLVGAYGLIGTSAAMEQACRLISKVLHTPYTVLLQGETGTGKEVVARAIHT
AGPRKAKAFVVQNCAAFPEGLLESELFGYRKGAFTGADRNHGGLFDAAHGGTLLLDEIGD
MPLPLQAKLLRVLQEGEVRPLGASAAHKVDVRIIAATHRDLAAMVAEGRFREDLYYRLAQ
FPITLPALRERDGDVLQLARHFTGKVCAALGRPPVEWANTALDQLSSHGFPGNVRELKCL
VERAVLLCDDSVIRPEHLALPLAPEPATPDDVTLRQRMERVERTFLLDCLHKNHGNRTRT
ARELGVARRTLLYRLARLNIPFGDAREER
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgaccgataacctgcccggtggcggggccgacgcgctgaggtatgccgacgcgttgtct
gcctgtttcgcacgcttggggttcgagcgtgatgaacacgcgttacctgacggatgtgtc
agcacggcggcccggctgagccaatctgacgtcagccaattgtatctgctcgatgaagtg
accggccggcttgaactgatcgcccaacatctagcccaagtgtcgtcgctcaccgtcgtg
cctccacggcctggtcagcattcccaacagttgctgcacgacgccttgacccaaggcact
gggttgagcctggaggatgtgcaaggcagcggccatgacacaggttttctgcccgcattg
gcgacaccatggcgtgcgctattaatcgtgccgctgttcaatcaatgtgagcggataact
ggggtgctggtgtgcgcccgccaacagccggcccagctgcaaggctacgccccctcgttg
gggcatttgggcagctacgccgtgaaccggttacgcgtactgcgcggtaggcagcccaac
gtcggcccaaagcccgcaggccacaaacccttggttggcgcatacggcctgattggcacc
agcgcggcaatggagcaggcctgtcgtttgatcagtaaagttctgcacaccccttacacc
gtgctgttgcagggtgagaccggcacaggcaaggaagtggtggcccgggccatacacacg
gccgggccgcgcaaggccaaggcctttgtcgtgcagaactgcgcggcgttcccggaagga
ttgcttgaaagtgagctgttcggctaccgcaaaggtgcgttcactggcgccgatcgcaat
cacggggggctgttcgacgccgcacatggcggtacgttgctgttggatgagatcggcgat
atgccgctgcccttgcaagccaagttgctgcgggtattacaggagggtgaggttcgcccg
ctgggtgccagtgcggcacataaggtcgacgtacgcatcattgccgcgacccaccgcgac
ctcgcggcgatggtcgccgaagggcgctttcgcgaagacctctattaccgactggctcag
ttccccatcaccttaccggccctgcgcgagcgggacggcgatgtgctgcaactggcgcgc
catttcacaggcaaggtgtgcgcggcgctggggaggccacctgtcgaatgggcgaatacc
gccctcgatcaactgtccagccatggttttcccggcaacgtacgcgagctcaaatgcctg
gtggaacgcgccgtgttgttgtgtgacgacagcgtgattcggcccgagcacctggcactg
ccgctggcaccagagccggccactcccgatgacgtgacgctgcgccagcggatggagcga
gtggagcgtacgttcctgctcgactgcctgcacaagaaccatggcaatcgcacccgcacc
gcgcgggagctgggggtcgcccggcgcaccctgctttaccgtcttgcccgtttgaacatt
ccctttggcgatgcccgggaggaacggtga

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