KEGG   Plasmodium falciparum Dd2: PFDG_02427
Entry
PFDG_02427        CDS       T01051                                 
Name
(Broad) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pfd  Plasmodium falciparum Dd2
Pathway
pfd03030  DNA replication
pfd03410  Base excision repair
pfd03420  Nucleotide excision repair
pfd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PFDG_02427
   03410 Base excision repair
    PFDG_02427
   03420 Nucleotide excision repair
    PFDG_02427
   03430 Mismatch repair
    PFDG_02427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfd03032]
    PFDG_02427
   03400 DNA repair and recombination proteins [BR:pfd03400]
    PFDG_02427
Enzymes [BR:pfd01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PFDG_02427
    6.5.1.6  DNA ligase (ATP or NAD+)
     PFDG_02427
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     PFDG_02427
DNA replication proteins [BR:pfd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PFDG_02427
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PFDG_02427
DNA repair and recombination proteins [BR:pfd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PFDG_02427
   NER (nucleotide excision repair)
    Other NER factors
     PFDG_02427
   MMR (mismatch excision repair)
    Other MMR factors
     PFDG_02427
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C ICE2
LinkDB
AA seq 914 aa
MNFLILVVLIKMVVCKIINYVRSDYNFMLSFLRTRKIFSHKKIYFNFKVSKNFTKNSSSN
SYSDILKCFSFPRKGTNDKTKENETFEKGEVKEEEEKEEKDKNVKRKIINESSKNKRAKV
KNENDVIKKGSLFNCVVREDEKVNDLSSPKFNPVHFNINDLYLSEKDKEKHKFKDSLLFT
FLTNAFNQIEELKGSGTGSKKNVSIILSNIFRVLIYYSPNDLIPAVYITLNKVAPDYLNV
EAGVGEALILKTMSEAYSRTESSIKKDLQQIEDLGIIAENCSCKMRTIFPLPRLTIQSVF
HELKSIPNLIGSNSQQKKREVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVVQALSY
AFILTRPSIPDDIIKRGKEINENLINGKLDGTNNLINKSNNKTEEWLTQSGDRNCIKEEN
LNDELLSKDDINKCENMDSLINEIRIRNEKINKPNIFYNLIEKVGDTRLLPLFFKELKNI
YCEENNDIDIFECMEKSVKSALCELPNIEIIIQNLLNGDDMNTLSKKCTVKTGIPVQPML
AKPTKGVQEVLDRFNNVTFTCEYKYDGERAQIHYIDKDNIKIFSRNLETMTEKYPDVIQI
IKDQIGENVKECIIDSEVVAYDIVNNKILPFQVLTTRKRKDVDIENIKVKVCLFPFDLIC
CNGIPVIKEPLAVRRKLLYSLLKSKDGVLSYATHSEMNNIEDIDMFLQDAIENNCEGLMV
KTLVENASYEPSRRSLNWLKVKKDYVEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLAAYN
SETENFQTVCKAGTGFSDEILSTLYETLSEKIIPNKKSYYEVSDKLNPDVWFDAHYVWEV
KAADLSLSPVHTAAIGIYADDKGIGLRFPRFLRLREDKNAEQATTTQQIVDFYEAQFSSN
KNKNIDYNDDTESE
NT seq 2909 nt   +upstreamnt  +downstreamnt
atgaatttcctaatattagttgtattaattaagatggttgtatgtaaaattattaattat
gttagaagtgattataattttatgctgtcatttttaaggacgagaaaaatatttagtcat
aaaaagatttatttcaattttaaagtttctaagaattttacaaagaattcatcatctaat
agttatagtgatatattgtatgttttgcatcttacaaagaaattatatgatgaatatgta
tatatatatatatatatatatatatatatgtgtatatatttttatttatgtagaaaccta
taatttctatatttttgtgcaaatttttatattttatttttacattttgtttatttttta
gaaaatgtttctcttttccaagaaaaggaactaacgataagacgaaggaaaatgaaacat
ttgaaaaaggagaagtaaaagaagaagaagaaaaagaagaaaaagataaaaacgtcaaaa
ggaaaattattaatgaaagtagtaaaaataaaagagctaaagttaagaatgaaaatgatg
ttataaaaaaagggtcgttatttaattgtgttgtaagagaagatgaaaaagtgaatgatt
tgagctcacctaaatttaatcctgtacattttaatataaatgatttatatttatctgaaa
aagataaagaaaaacataaatttaaagactccttattatttacctttttaacaaatgcat
ttaatcaaatagaagaattaaaaggtagtggtacaggaagtaaaaaaaatgtatctatta
tattatcgaatatatttagggttttaatatattatagccctaatgacttaataccagctg
tatatataaccttaaataaagtagctcccgattatttaaatgtcgaagctggtgtaggtg
aagccttgatattaaaaacgatgtctgaagcatatagtagaacggaaagtagtataaaga
aggatttacaacaaattgaagatttaggaataatagcggagaattgttcttgtaaaatga
gaacaatatttccgttacctcgcttaactatacaatctgtttttcatgagctaaaaagta
tacctaaccttataggatcaaattcacaacagaagaaaagggaagtcataaagaaattgt
tagtaagtgctaaaacatctgaagctaaatatattgtaagatttttacaacagcgtttaa
ggataggtgtaaattctgcaacggtcgtacaagctttgtcatatgcctttatattaacaa
gacctagtatacctgatgatattataaaaagagggaaagaaattaatgagaatttgatta
atggtaaattggatggtactaataatttaattaataaatctaataacaagacggaagagt
ggctaacccaatcaggtgataggaattgtataaaggaagaaaatttaaatgatgaattat
tatcaaaggatgatataaataaatgtgaaaacatggattcattaattaatgagatacgta
ttcgaaatgaaaaaataaacaaaccgaatattttttataaccttattgaaaaggtgggtg
acacacgattattaccattattttttaaagaattaaaaaatatatattgtgaagaaaata
atgatattgatatatttgaatgtatggaaaaatcagttaagagtgctttatgtgaattac
ccaatatcgaaataataatacaaaatttattaaatggtgatgatatgaataccttaagta
aaaaatgtactgttaaaacaggtattcccgttcaacctatgttagcaaaaccaactaagg
gtgttcaagaagtgttggatagatttaataatgttacatttacttgtgaatataaatatg
atggtgaacgagcacaaatacattatatagataaagataatataaaaatattcagtcgaa
atttagaaacgatgactgaaaaatatccagatgttatacaaataataaaggatcaaatag
gagagaatgtaaaggaatgtattatagatagtgaagttgttgcttatgatatagttaata
ataaaatattaccattccaagtcttaactactagaaaaagaaaagatgtagatatagaaa
atattaaagtgaaagtatgtctttttccatttgatttaatatgttgtaatggtataccag
taattaaagaacctttagctgttagaaggaaattattatattctttattaaagtcaaaag
atggggtgttatcatatgctacccattctgaaatgaataatattgaagatattgatatgt
tcttacaagatgctatcgaaaataattgtgaaggtttaatggttaagactttagtagaaa
atgcatcctatgaaccttctaggagatcattaaattggttaaaggtcaagaaagattatg
ttgaaggtctttcagattcggttgatttagttccgatagctggttattatgggaaaggaa
aaagaagtggagtatatggagcttttgttttagcagcttataattctgaaacggaaaatt
ttcaaaccgtttgtaaggcaggtacaggttttagtgatgagatattaagtacattatatg
aaacattaagtgaaaaaattataccaaataaaaaatcgtattacgaagtatctgacaaat
taaatcctgatgtgtggtttgatgctcactatgtatgggaggttaaggcagcagatttat
ctttgtcacctgtacatacagcagctattggtatatatgcagatgataaaggtattggtt
taaggtttcctcgatttttacgtttaagagaagataaaaatgcagaacaagcaaccacta
cacaacaaattgtagatttttatgaggcacaatttagtagtaataaaaataaaaatattg
attataatgatgatactgaaagtgaataa

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