Pseudomonas ogarae: PSF113_0046
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Entry
PSF113_0046 CDS
T01734
Symbol
algB
Name
(GenBank) AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
pfe
Pseudomonas ogarae
Pathway
pfe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSF113_0046 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pfe02022
]
PSF113_0046 (algB)
Two-component system [BR:
pfe02022
]
NtrC family
KinB-AlgB (alginate production)
PSF113_0046 (algB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
cREC_REC
VpsR
AAA_22
Mg_chelatase
AAA_2
AAA_19
AAA_16
MCM
nSTAND3
HTH_23
HTH_29
Xre-like-HTH
IstB_IS21
DUF815
HTH_50
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AEV60081
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Position
complement(50904..52250)
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AA seq
448 aa
AA seq
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MESATEHQGRILLVDDESAILRTFRYCLEDEGYSVATANSAAQADALLQRQVFDLCFLDL
RLGEDNGLDVLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGEVRKPKDGLDSHSPAMKVVLETARQVASTDANILILGESGTG
KGELARAIHAWSKRAKKSCVTINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRF
REDLLYRLNVITLHLPPLRERVEDILTLADRFLARFVKEYARPARGFSDEAREALLGYRW
PGNIRELRNVVERASIICPQEKVEISHLGMAEQPVNNAPRIGAALSLDELEKAHIGAVLA
TADTLDQAAKTLGIDASTLYRKRKQYNL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaatccgccactgagcatcaaggccgcattctgctggtagacgacgagtccgccatc
ctgcgtacgttccgatactgcctggaagacgaaggctatagcgttgccaccgccaacagc
gccgcgcaggccgacgcactgctgcaacgccaggtgttcgacctgtgttttctcgacctg
cgcctgggcgaagacaacggcctggatgtcctggcgcaaatgcgtatccaggccccctgg
atgcgggtggtcatcgtcaccgcccactcggcggtcgataccgcggtcgatgcgatccag
gccggggccgccgactacctggtcaagccgtgcagccccgatcaattgcgcctggcgacc
gccaagcaattggaagtacgccaactgtcggcaaggcttgaagcccttgaaggggaggtg
cgcaagcccaaggatggcctggactcccacagcccggcgatgaaagtcgtcctggaaacc
gcgcgccaggtcgccagcaccgatgccaacatcctgatcctcggcgagtccggcaccggt
aaaggcgagttggcccgggcgatccatgcctggagcaagcgggcgaaaaagtcctgcgtc
accatcaattgcccgtcactgaccgctgaactgatggaaagcgaattgttcggccatagc
cggggggccttcaccggcgccagcgagagtacgttggggcgcgtcaaccaggctgacggc
ggaacgctttttctcgacgagatcggcgattttcccctgacgttgcaacccaagttattg
cgtttcatccaggacaaggaatacgagcgggtaggggacccggtcacccgccgcgccgat
gtgcggattctcgccgcgaccaacctcaacctcgaagacatggtgcgcgatgggcgtttt
cgcgaagacctgctgtatcgcctgaacgtcatcaccctgcacctgccgccgctgcgtgag
cgcgtcgaagacatcctgaccctggccgaccgctttctggcccgcttcgtcaaggaatac
gcgcgcccggcccggggcttcagcgacgaagcgcgcgaagcgctgctaggctatcgctgg
ccgggcaacatccgggaactgcgcaacgtggtcgagcgcgccagcattatctgcccgcag
gaaaaagtcgaaatcagccacttgggcatggccgagcagccggtcaacaatgcgccgcgc
atcggcgccgcactgagcctcgacgaattggaaaaagcccacatcggcgcggtgctggcc
acggccgacaccctcgaccaggcggccaagaccctgggtatcgatgcttccacgctgtat
cgcaaacgcaagcagtacaacctgtga
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