Pseudomonas ogarae: PSF113_2454
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Entry
PSF113_2454 CDS
T01734
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfe
Pseudomonas ogarae
Pathway
pfe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSF113_2454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfe03021
]
PSF113_2454
Transcription machinery [BR:
pfe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSF113_2454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
HTH_24
Sigma70_ECF
GerE
TnsD
HTH_11
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AEV62461
LinkDB
All DBs
Position
complement(2875413..2875946)
Genome browser
AA seq
177 aa
AA seq
DB search
MQKAAAMSETLPANNDNHLRVIEALYAGHHGWLYATLKKKLGNAMDAADLAQDTFTRILA
SQVTAIDQPRAYLSCVAKGILVNWYQRKALERAYLEALAHLPAQEVPSPELRFLVLETLH
DIDAMLDTLPAPVKRAFLLSQIGGLKYDDIAQQLNVSLITVKRYMKQAFVQCLMLVD
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaagctgcagccatgagcgaaaccctgcccgcgaacaacgacaatcatctgcgc
gtgatcgaagcgctgtacgcaggtcatcacggctggctgtacgccacgctgaagaagaaa
ctgggcaacgccatggatgcggcggacctggcgcaagacaccttcacgcgcattctggcc
tcgcaagtcaccgccattgaccaaccccgggcctacctgagctgcgtggccaagggcatc
ctcgtcaactggtatcagcgcaaggcattggaacgtgcttacctggaggcgctcgcgcat
ttgccggcccaggaagtgccgtcccctgagttgcgtttcctcgtgctggaaaccctgcac
gacatcgacgccatgctcgacacgctcccggcaccggtgaaacgggcattcctgctgtcg
cagatcggcggcctgaaatacgacgacatcgcccagcagttgaacgtctcgctgatcacg
gtcaaacgctacatgaagcaggcgttcgtgcagtgcctgatgctggtggactga
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integrated database retrieval system
