Pseudomonas ogarae: PSF113_2468
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Entry
PSF113_2468 CDS
T01734
Name
(GenBank) cable pili-associated 22 kda adhesin protein
KO
K20276
large repetitive protein
Organism
pfe
Pseudomonas ogarae
Pathway
pfe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSF113_2468
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_1
CarboxypepD_reg
DUF1293
Motif
Other DBs
NCBI-ProteinID:
AEV62475
LinkDB
All DBs
Position
complement(2889865..2895588)
Genome browser
AA seq
1907 aa
AA seq
DB search
MDSSNRFNPILHVVNPVFGFWASLQVECSWNESGSLFTCNTVRYRVKKNGRTKGNIFFGF
SSAGTWGVSEISGNAEQDDAWHDISEGGTVAGNTRTATIYFEYIYDMQLFPDPSAKTELG
ITFSLVPPTIDNPRVVVTPRPKITGKGIPNALVKLYQHNVGSILFGSGNVKSDKTWEITL
TEPLWMADPFTMTASQSVNGVPSGWAAPASFAVLFKPVISGVTVSADGRPTVNGTGGLRD
ATIEVYLYIGAGGVKLTGTVQPNGSWSATADAPWVPQTYMIYARQIGKVTGMPSGLGEPY
TFTVKPPKPTITNPGVIRVPRPTISGTGGVNGALVKLYKHNVGSVVFGEDTVKSGDAWTV
TLTQPLPMADPFTMTASQTLNNIPSDWADPVSFAVLFKLVISGITFYPDGRPIVRGTGGL
QGATVDIRFQGGAGGTQLTTTVEAGGSWMAVAREPWPPNTYTITAKQIGSVTQQSSDWSD
HETFTVKPPKPAITALPNPIPSNQALTITGVYSTIATLRMLTEAGANIPGTFTATSNTSI
RVFSPTGGWRPGLQKVKVTQTVNSAESDPSDLATLRVKSPKPVITNPLVVWIPQPTISGT
GVAGALVKLYRHNDSSLVLGSDTVDPDDNTWEITLEQPLRMADPFTMTASQSVNDIPSDW
ADLVSFAVLFKLVISEITVSADGRPTVRGTGVFEDATVAIRFQGGGETHLTATVEPNGDW
RAIASEPWPPGTYTITAKQIGKVTEQSSDWADHKEFTVSAKPPKPVISALPELVPADQQL
NITGVSGTGTVTLTMLTEAGATISGTFSPSTGTTRTFRRAVNWAAGTHRVKVVQTVDGMT
SDPSDVAILRVQPPAPLLFNPPSPAPADQVLTIAGVYPETVTLTMLTEADATISGTFSPI
SENRYTFTPIPNWTPGTHKLKVVQTVDGVPSDPSALATFGVQPPKPAITVLPNPVLTNQQ
LNITGVYSGTGTVTLKMFTPAGDEISGSFNPSTGTTRTFTPEPDWEPGTQQVKVVQTVDG
VASDPSDLATLKVRPPKPAITALPDPVLADQRLTITNVYSNVSILTVFTEAGDEIPGAFR
VIGTTRTFKPTTNWAPGIQKVKVMQTVYGVDSEPSDLATLKVRPPKPAITVLPDPVPADQ
PLTITGVYSGTGTVTLKMFTPAGDEISGSFNPSTGTTRTFTPEPDWEPGTQQVKVVQTLD
GVASEPSDLATLKVRPPKPAITAMPDPVPANQQLNITGVYSGTGTVTLTMFTQASDEIPG
SFSPSTGATRTFAPETDWDRGTHRVKVVQTVDGVTSNPSDNCTFTVKTEDKPEAPQFELP
LPGSKTSTRPRIKVIGQPHALMTVRREGAQTLHSDTASPEGVLEFVVETPLPPGPNALEA
KQKSDAPESDWSEPHRFTVKEPPQTPVIDAPTPGSRNPRKPTIRGKGETRGQILLRHEDD
PENLIDTLNGVTSWRWTAQTSWSVGHYTIQAQQADDGDDSSWTEPRTFEVVDARYGVGDA
GPVLAQPVLSNNESVLLRVQVVSGVTGKAAEGVTVEWRIAGEQAALATTVTSADGWARYL
YTPGTAGEHTVLADLTNENQGVVITQQFEVTALADDAWAQALELYLDGEKVDLAEGDIAL
LDGKSYELRLEVNSARPLTAASVTLEDLSQAEALGLAFTPPLGTPQPLVEGQSVHWSITC
NTGKSGYFGLKLTSSILPDWHLPGRVIAQDLSEDVEVHLDTFAQVFGGDPAYPCLGATHT
LTVRPNTRSLLLGEDVMLELTDETVDLGVIVSPAPDLPQPLGADGVSWSLNCTDSTDSGR
FAVRLKVREWDFRSLELPMSLGHNKVEITERFGPTEMGGSASYWMYGIRATSTFTGQPAG
GVPVTVTVSEKPPTQGRTAQTGWIYVNYYDDESASLIIRNLYDNSWG
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atggatagctctaatcgtttcaatccgatactgcacgtagtaaaccccgtttttggcttt
tgggcatcgcttcaagtggaatgttcgtggaacgaatcaggctccctttttacttgcaac
acagtacgatacagagtcaagaaaaatggaagaaccaagggcaatattttctttgggttt
tcctcggctggcacttggggggtgagcgagataagtggcaatgccgaacaagatgatgcg
tggcacgacattagtgaaggtggaactgtagctggcaatactcgcaccgcgacgatatat
tttgaatatatatacgatatgcaattattccccgatcccagcgcgaaaacagagttggga
attacattttctcttgtaccaccgacgattgacaaccccagggttgtagtgacacctcga
cccaaaataaccggaaagggtatccccaacgctcttgtcaaactgtatcagcacaatgtc
ggtagcatacttttcgggagcggcaacgtgaagtccgataagacgtgggaaatcacgctg
acagaacctttatggatggccgaccccttcacaatgacggcttcgcagagcgtgaacggt
gtaccctctggctgggcggcccccgccagctttgcggtactgttcaagccggtaatctcc
ggtgtaaccgtttctgccgacggcagacccaccgttaacggaacaggtgggcttagagac
gccacaattgaagtctacctttacataggagccggtggtgtcaagttaaccgggactgtt
caaccgaacggcagttggtcggctactgccgatgcaccctgggttccccagacgtacatg
atctatgcaagacagattgggaaagtcaccgggatgccttcagggttgggagagccctat
acctttactgtcaaaccaccaaagccaacgattaccaaccccggagttataagggtacct
cgaccaacaataagcggaacaggtggtgtcaacggagctcttgtcaaactgtataaacac
aatgtcggcagcgtagttttcggggaagataccgtgaaaagcggtgacgcgtggacagtc
acgctgacacaacctttgccgatggccgaccccttcacaatgacggcttcgcagaccttg
aacaatataccctccgactgggcggaccccgtcagctttgcggtcctgttcaagttggtc
atctccggcataaccttttatcccgacggcaggcccatcgtccgcggaacaggtgggctt
cagggcgccactgttgacatccgatttcaaggaggagccggtggtactcagttaacgacg
actgttgaagcgggtggcagctggatggctgttgcccgcgaaccttggccccccaatacc
tacaccatcacggcaaaacagattgggagtgtcacccagcagagttcagactggtcggat
cacgaaacctttactgtcaaaccaccgaagccggcgatcaccgctctgcccaacccgatt
cctagcaatcaggccctgaccatcaccggcgtttattccaccatcgccaccctgaggatg
ctcacggaagcaggcgccaacatacccggcaccttcaccgccacctccaacacgagtatc
cgcgtcttcagtccgacgggaggctggagaccgggcctccaaaaggtcaaggtcacgcag
accgtgaacagcgcagagtccgacccaagcgatctggcgacccttagggtaaaatcacca
aaaccggtgattaccaaccctctggttgtatggatacctcaacccacaataagcgggaca
ggtgttgccggtgcccttgtcaaactgtatcggcacaatgacagtagtttggttctcggg
agcgacaccgtggatcccgatgacaacacttgggaaatcacgctggaacaacctttgcga
atggccgaccccttcacaatgacggcttcgcagtccgtgaacgatataccctccgactgg
gcggacctcgtcagctttgcggtcctgttcaagttggtcatctccgagataaccgtttcc
gccgacggcagacccaccgtcagaggaacaggtgtatttgaggacgccactgttgccatc
cgctttcaaggaggaggtgaaactcatttaaccgcgacggttgaaccgaatggcgactgg
cgggccattgcctccgaaccgtggccccctggtacatacaccatcacggcaaaacagatt
gggaaagtcaccgagcagagttcagactgggccgatcacaaggaatttacggtttctgcc
aaaccaccgaaaccggtgatctccgctctgcccgaactggtcccagccgatcagcaactg
aatatcaccggtgtttccggcaccggcaccgtcaccctgacgatgctcactgaggcaggc
gctacaatatccggcaccttcagccccagtactggaacgacccgcaccttcaggcgggca
gtgaactgggcagcgggcacccaccgggtcaaggtcgtgcagaccgtggacggtatgacg
tccgatccaagcgacgtagctatcctcagggtgcaaccaccggcaccgctactcttcaat
ccgcccagcccggccccagctgatcaggtactgaccatcgccggcgtttatcccgagacg
gtcaccctgacgatgctcactgaggcagacgccacaatatccggcaccttcagccccatc
agcgaaaacagatacacctttacaccgataccaaactggacaccgggcacccacaagctc
aaggtcgtgcagaccgttgacggtgtcccgtccgacccaagcgctctggctaccttcggg
gtgcaaccaccgaaaccagcgataaccgtcttgcccaacccggtcctaaccaatcagcaa
ctgaatatcaccggtgtttattccggcacgggtaccgtcaccctgaagatgttcactcca
gcaggcgacgagatatccggcagcttcaaccccagcaccggaacgacccgcaccttcacg
ccggaaccagactgggaaccgggcacccagcaggtcaaggtcgtgcagaccgtggatggt
gtggcgtccgatccaagcgatctggcgacccttaaggtgagaccaccgaagccggcaatc
accgccttgcccgacccggtcctggccgatcagcgactgaccatcaccaacgtttattcc
aatgtctctatcctgacggtgttcactgaggcaggcgacgagatacccggcgccttcaga
gtcatcggaacgacccgcaccttcaagccaacaacaaactgggcaccgggaatccaaaag
gtcaaggtcatgcagaccgtgtacggtgtggattccgagccaagtgatctggcaacccta
aaggtgagaccaccgaagccggcaatcaccgtcctgcccgacccggtcccagccgatcag
ccgctgaccatcaccggtgtttattccggcaccggtaccgtcaccctgaagatgttcact
ccagcaggcgacgagatatccggcagcttcaaccccagcaccggaacgacccgcaccttc
acgccggaaccagactgggaaccgggcacccagcaggtcaaggtcgtgcagaccttggat
ggtgtggcgtccgagccaagcgatctggcaaccctaaaggtgagaccaccgaagccggca
atcaccgccatgcccgacccggtcccagccaatcagcaattgaatatcaccggcgtttat
tccggcaccggcaccgtcaccctgacgatgttcactcaggcaagcgatgagatacccggc
agcttcagccccagcaccggagcgacccgcacttttgcgccggaaacagactgggaccgg
ggcacccaccgggtcaaggtcgtgcagaccgtggacggtgtgacgtccaatccaagcgac
aattgcaccttcaccgtgaagacggaggataaacccgaagccccccaattcgaactgccg
ctcccagggtccaaaacctcaacgcgcccgcgcatcaaggtcatcggccagccccatgca
ctgatgaccgtacggcgtgagggtgcgcagacattgcactcggacactgcgagccccgaa
ggcgtgctggagttcgtggtcgagacgcccttgccacccggaccgaacgcccttgaggcc
aaacagaagagtgatgcccccgagtccgactggagcgagcctcatcgattcacggtaaag
gaaccgccacaaacaccggtgattgatgcgccaacaccgggcagccggaaccctcgcaaa
cccacgattagaggcaagggcgaaacccgcgggcagatacttctgcgccatgaggatgac
cccgaaaacctgattgacaccctcaatggcgtgacgtcctggcgctggaccgcccagacg
tcatggagcgtcggccactacaccatccaagcgcagcaggcagacgacggcgacgattcg
tcatggaccgagccgcgtacgtttgaagtggtcgatgcccgatacggcgtcggcgacgcc
ggcccggtactcgcccagccggtgctgagcaacaacgagagcgtgctgttgcgggttcag
gtcgtgtccggtgtcaccgggaaggcggccgagggggtcacggtggagtggcgtattgcg
ggtgagcaggccgccctggcgacgaccgttaccagcgcggatggctgggcccgttatctc
tataccccaggcactgcgggagaacataccgtcctggcggatttaacaaacgagaatcag
ggtgtagtgattacgcagcagtttgaggtaaccgccttggcggacgatgcctgggcacag
gcgctcgagctttatctggacggagaaaaggttgatctggccgaaggggatatcgcgctg
ctggacggtaaatcctatgaactgaggcttgaagtcaacagcgctcggccattgacggcc
gccagcgtcacgcttgaagacctgtcgcaagccgaggcacttgggctggcgttcactccg
ccgctgggcacgccacaaccgctggtggaaggacaatccgtgcattggtcgatcacttgc
aacacgggcaagagtggttatttcggattgaaattgaccagctcgatcttgccggactgg
catctaccggggcgggtgatcgcccaggatctgagcgaagacgtagaggtgcatcttgat
acttttgcccaggtattcggcggtgacccggcgtatccctgcctgggtgcgacgcatacc
ctgaccgtgcgacccaacacgcgcagtttgttgcttggcgaggacgtgatgctggagttg
actgacgaaactgtcgatctcggggtaatcgtgagccctgccccggatctccctcaaccg
ttaggggcggacggggtgagttggtcgttgaattgcaccgacagcactgacagcggccgc
tttgcggtgcgattgaaggtacgggagtgggacttcaggtccctggaacttccaatgtcc
ctggggcataacaaggtcgagatcactgaaaggtttggtcccacggagatgggaggatcg
gcttcttattggatgtatggcattcgagcgacgtccaccttcacagggcagcctgcgggg
ggtgttccggtgacggtcacggtttcagaaaagccacctacgcaaggtaggacggcgcaa
acggggtggatatatgtcaattattatgatgatgaatccgcgagcttgatcattcgcaac
ctgtatgacaacagttggggctga
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