Pseudomonas ogarae: PSF113_3220
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Entry
PSF113_3220 CDS
T01734
Name
(GenBank) heme uptake regulator
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfe
Pseudomonas ogarae
Pathway
pfe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSF113_3220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfe03021
]
PSF113_3220
Transcription machinery [BR:
pfe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSF113_3220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
HTH_24
HTH_11
HTH_40
HTH_20
DUF1804
HTH_38
HTH_36
HTH_28
HTH_17
TetR_N
HTH_29
Terminase_5
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AEV63219
LinkDB
All DBs
Position
3790847..3791368
Genome browser
AA seq
173 aa
AA seq
DB search
MSANDLSLRSAVDVLYSDHHGWLQGWLRKRLGNTFDAADLAQDTFVRVIKARTALDIREP
RPYLSMIAKGLLIDLFRRRSLEQSYLEVLAAMPQEQHPSLEEQAIMLQALMEIDRLLLGL
GPRVRQAFILSQFDGLTYPQIAEHLGVSVRTVNNHMAKAMEHCCLMQIQLQLS
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaacgatctgtctctacgcagtgctgtcgacgttctgtacagtgatcatcac
ggttggctccagggttggctgcgcaagcgcttgggcaacaccttcgatgccgcagacctt
gcccaggatacgtttgtgcgggtcatcaaggcgcgcactgcgctggatatccgtgagcca
cgaccgtatttgtcgatgatcgccaaagggctgttgatcgatctgtttcgccgtcgctcg
ctggagcaatcctacctcgaagtattggcggccatgccgcaagagcagcacccctcgctg
gaggagcaggcgatcatgctccaagccctgatggagatcgaccgcttgctcctggggttg
gggccgcgggtcaggcaggcgttcatcctgtcgcagttcgatggcctgacgtacccgcaa
attgccgaacacctgggggtcagcgtacgcacggtcaacaaccacatggccaaggccatg
gagcattgctgcctgatgcagattcaactgcagttgtcatga
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integrated database retrieval system
