Paludibaculum fermentans: IRI77_08260
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Entry
IRI77_08260 CDS
T06895
Name
(GenBank) heparinase II/III family protein
Organism
pfer
Paludibaculum fermentans
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Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III
Alginate_lyase
Hepar_II_III_N
Motif
Other DBs
NCBI-ProteinID:
QOY89935
UniProt:
A0A7S7SNB4
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Position
complement(2079280..2081550)
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AA seq
756 aa
AA seq
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MAWILLFLMTLPAAAEPRFLLNRADVARIKAQASAQPVVQRLIQRAENWPAAHVENYGLK
EWALPAEGAGWSHAYVCPVHGARLKQTRGQNLCPVDGKDYHGWPVDNVVYMQRNGDNAAA
VRDLGLAYVLTGRAEFAAKARRIVNAYTVLYPTLPIHDNNNKLNTQSGARVMSQTLSEAS
WLVPLVFGYDLVRDTMTAEERIGFERSVLKNAAVILTGNNRGKSNWQSWHNCALLAIGLT
VGDQDLVRAALDGPGGFKFQMRESITPDGPWFEGSWGYHFFSVEPLMLSIEMAKRAGLAL
PEAAAFRKMLDAPLRAVFPDGTLPNFNDSGLVKLAAYAKHYSIGYRMFGDSRYVPLARQA
SSDLETVLWGADALPEVAPVAAVSDLMPDAGLATLRVRENDHVIAVKFGPHGGGHGHFDK
LTINSYWNGAQQAADPGTQAYAAPTHATWDKMTIAHNTVSVDEKPQAAATGKLLEWIALP
SAAAIRVSAGDAYPGVELERTLVHTPWYTLDLFDVKAADGKQHHFDWMYHNYGQIFGDLR
WDQAIGLSRLNGYQHLSHPAANRGDADWSEIIRQQQLGTVVHMIGSPESIVIAGTGLGPD
LQVPVPFLMARRQAVSTRFSALYEPMTQGGYVLQFSSPAPNEFLVNGAGMNDRIHVEPGR
FSVLHQVFGKPVQLFLSGIAETELLKRSQTTPIQVDWSADGATVDLFMEGTLEGAVRITA
PAAKLIRLNGKKIECRANGPYRWASLPNLGNLEPCQ
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
gtggcctggatcctgctgtttctgatgacgctgccggcggcggccgagccgcggtttctg
ctgaaccgggcggacgtggcgcgcatcaaggcgcaggcctcggcccagccggtggtgcag
cggctgattcaaagggcggagaactggccggcggcgcatgtcgagaactacgggctgaag
gagtgggccctgccggcggaaggcgcggggtggtcgcacgcctatgtctgtccggtgcat
ggtgcgcgcttgaagcagactcgggggcagaatctatgcccggtcgatgggaaggactac
cacggctggccggtggacaacgtggtctacatgcagcggaatggcgacaatgcagccgct
gtgcgggatctggggctggcatatgtgcttaccgggcgggcggagttcgcggcgaaggcg
cggcggatcgtgaacgcttatacggttttgtatccgacgctgccgattcatgacaacaac
aacaagttgaatacgcagtccggcgcgcgagtgatgtcgcagacgctgtccgaggcgagc
tggctggtgccgctcgtgttcgggtacgacctcgtgcgggacacgatgacggcggaagag
cgaattgggttcgaacgttcagttttgaagaatgcggcggtgattctgaccgggaacaac
cggggcaagagcaactggcagagctggcacaactgcgcgctgctggcgatcgggttgacg
gtgggggatcaggatctggtgcgggcggcgctggacgggccgggcggcttcaagttccag
atgcgggagagcattactccggacgggccgtggttcgagggctcgtggggctaccacttc
ttttcggtggagccgctgatgctcagcatcgagatggcgaaacgggccgggctggcgttg
cccgaggcggcggcgttccggaagatgctggatgctccgctgcgggcggtgttcccggat
ggcaccttgccgaacttcaacgactccgggctggtgaagctggcggcctatgccaagcac
tacagcatcgggtatcgaatgttcggcgacagccggtatgttccgctggcgcggcaggca
agttccgacctggaaactgtactttggggtgcggacgcgctgccggaggttgcgccggtt
gcggcggtgagcgacctgatgccggatgcgggcttggcgaccttgcgggtgcgcgagaac
gatcatgttattgccgtcaagtttggcccgcacggcggcggtcacgggcatttcgacaag
ctgacgatcaacagttactggaatggagcccagcaggcggccgatccggggacacaggcg
tacgcggctccgacgcatgccacctgggacaagatgacgatcgcgcacaacacggtgtcg
gtggatgagaagccgcaggcggcggcgaccggcaagctgttggagtggattgcgttgccg
tcggcggctgcgatccgggtgtcggcgggtgatgcgtatccaggcgtggagttggaaagg
acgctggtgcatacgccgtggtacacactggatctgttcgacgtgaaggctgctgacgga
aagcagcaccatttcgactggatgtaccacaactatgggcagatcttcggagatttgcgc
tgggatcaggcgattgggctgtcgcgactgaacgggtaccagcatttgagccatcccgcc
gccaaccgcggagatgcagactggtcggagatcatccggcagcagcagcttggcacggtc
gttcatatgatcgggtctccagagagcatcgtgattgccggaaccgggttgggaccggac
ctgcaggtgccggtgccgtttctgatggcgcgaaggcaggcggtgtcgactcggttctcg
gcgctttatgagccgatgacccagggtggctatgtcctacagttttccagcccggcgccg
aacgagttcctggtgaacggggcagggatgaacgaccggatccatgtggagcccgggcgg
ttctccgtgctgcatcaggtctttgggaagccggtgcagttgtttctctccgggatcgcg
gagacggagctgctgaagcggtcacaaactacacccattcaagtggactggtcggcggac
ggggcgacggtggatctattcatggaagggacgctggaaggcgcggtgcggattacggct
ccggcggcgaagctgatccgattgaacggtaagaagatcgagtgccgggcgaacgggcct
taccgctgggcgtccctgccgaatctggggaacctggagccgtgccagtga
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