Pseudomonas simiae PICF7: PFLUOLIPICF710720
Help
Entry
PFLUOLIPICF710720 CDS
T03767
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFLUOLIPICF710720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pff03021
]
PFLUOLIPICF710720
Transcription machinery [BR:
pff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFLUOLIPICF710720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
HTH_17
HTH_29
HTH_24
Sigma70_ECF
Sigma70_r3
MerR
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AJZ93993
LinkDB
All DBs
Position
complement(2341594..2342112)
Genome browser
AA seq
172 aa
AA seq
DB search
MSSIQNPHSELVGALYRDHRGWLLAWLRRNVACPSRAEDLSQDTFMRLLGRDELRAPREP
RAFLMAIAKGLLFDYFRRAALEQAYLTELMLIPESEHPSPEEQHLILEDLKAIDRLLGKL
SSKARAAFLYNRLDGMGHAEIAQRLGVSVPRVRQYLAQGIRQCYIALYGEPQ
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtcgatccagaacccacacagtgagcttgttggcgcgttgtatcgcgaccatcgt
ggctggctgctggcttggcttcgacgcaacgtggcctgcccgagccgcgccgaagacctg
agccaggacaccttcatgcgtctgctgggccgtgacgagttgcgcgcgccccgcgaaccc
cgtgcgttcctgatggcgatcgccaagggcttgctgttcgattacttccgtcgcgccgcc
ctggaacaggcctacctcaccgaactgatgctgatcccggaaagtgaacacccttcgccg
gaagaacagcacctgatcctcgaagacctcaaggccatcgaccgcctgctcggcaagctg
tcgagcaaggcccgcgccgccttcctttataaccgtctcgacggcatgggccacgccgaa
atcgcccagcgcctcggcgtgtcggtgccccgcgtgcgccagtacctggcccaaggcatt
cgccagtgctacatcgcgctgtatggcgagccgcagtga
DBGET
integrated database retrieval system
