KEGG   Plasmodium falciparum HB3: PFHG_04562
Entry
PFHG_04562        CDS       T01052                                 
Name
(Broad) hypothetical protein
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
pfh  Plasmodium falciparum HB3
Pathway
pfh03022  Basal transcription factors
pfh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PFHG_04562
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFHG_04562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfh03021]
    PFHG_04562
   03400 DNA repair and recombination proteins [BR:pfh03400]
    PFHG_04562
Transcription machinery [BR:pfh03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     PFHG_04562
DNA repair and recombination proteins [BR:pfh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     PFHG_04562
SSDB
Motif
Pfam: Ssl1 VWA_2 C1_4 VWA Tfb4
LinkDB
AA seq 401 aa
MQNPQNSENKVIFVEDVVRDFDENEIFEEITGKFTWEQDVERSWNLLVENNGVLQHVSQE
NNENENKEKYRKNQGSSLRKGIFRHIIILFDMSSSMKERDLKPDRINVALECVESFLKNF
FFKNPVGHVGVVALKNSSAKLIQPFTSNVDDILNSILKERTAGLQGSPSLEEGLQIAHDL
LIDMPLYGTKEVLIMYGSIRTCDKKNILNVLELLVKSNIYVNCISIAPEMHILKHICEKS
NGFYKICSSKNSLMNEINNNAETPLWMQGMEPQLIHICFPTKKKISTQIMCSCHGKLNTD
TYVCNFCNSYTCKIPSKCKVCGIHLISMHDLSHITNNLQGSPLFIEIKNEQGNYKVCSSC
NQQLYNKIYQCTKCQHIFCLECDIFIHEELNQCPFCLINDT
NT seq 2137 nt   +upstreamnt  +downstreamnt
atgcaaaatcctcaaaatagtgaaaataaagttggaaaagaataaaaatgaaataatata
cataatataataattatacattataatatttacatatatatatatatatatatatatatc
atttctttatattgttatttcaaaatgatttaatattttaaatatttcttatatataata
tttcccatttcttttattaatatatatatatatataggtcatttttgttgaagatgttgt
aagagattttgacgaaaatgaaatatttgaagagataactgggaaatttacatgggaaca
aggtatgtatgtatttatgtatatatatataaggatatataatcagggaaaaaaaaaaca
tgaagcagatattataaacatatataatgaattttatataagatatatcttattttagta
tttaattttaagtgtacataattttttttttaacattatcatatttctattggataaaaa
tatatgttaccttatccatatttcttataataatatatttatttatttctctcatatata
atatatgaatatgacttattcaaacatgcatatgattatcgatattaaaaggattaaatg
tttatattatctcatccatatatatatatatatatatatatatataacataatttgtaca
attttgcttttattaacacattagatgttgaacgatcatggaatttgctggtagaaaata
atggtgtgctacaacatgttagccaagagaataacgaaaatgaaaataaggagaaatata
gaaagaatcaaggatcttccttaaggaaaggaatattcaggtatcataaaaaaaaaaaaa
cataacatatatgtatatgtttttaactggtattatttactcatactacaattcattcta
aatatgccatttttttttttttttttttttgaacacatcatggtttttttctttaattat
aaagtgtggaaaaagggaaaaagaatagttgtttttcctttgaattacttatatatatat
acatatatatattattatttaaatattcgcagacacataatcatactatttgacatgtct
agtagtatgaaagaaagggatttaaaaccagataggataaatgtagctttagaatgtgtg
gaagtaataagatttataaaaataaaaagaaacaataaatgaaaatacatgcgtattata
tatatatatatatatatatttatttatatatttatttatttatatgatttattttattta
attttgtttgaagtcatttttaaaaaactttttcttcaaaaatcctgtcggacatgttgg
tgtagtagctttaaagaatagttcagcaaaattaatacaaccatttacatcaaatgtaga
tgatatattaaattcgatattaaaggaaagaactgcaggtcttcaaggttccccttcatt
agaagaaggattacagatagcacatgatttattaattgatatgccattatatggaacaaa
agaggttttaataatgtatggatctataagaacatgtgataagaaaaacattttaaatgt
attagagttattagtaaaaagtaatatatatgtaaattgcatttcaatagctccagaaat
gcatatattaaagcatatttgtgaaaaatcaaatggtttttataaaatatgttcaagtaa
aaattctttaatgaatgaaataaataataatgcggaaacacctttatggatgcaaggtat
ggaacctcaattaattcatatatgttttccaacaaagaaaaaaatcagtactcaaataat
gtgttcatgtcatggtaaattaaatactgatacatatgtttgtaatttttgtaatagtta
tacttgcaaaataccatccaaatgtaaagtatgtggtatacatttaatatcgatgcacga
tctttcacatattacaaataatcttcaaggttctcctttatttatagaaataaaaaatga
acaaggaaattataaagtatgttcatcatgtaaccaacaattgtataacaaaatatacca
atgtacaaaatgtcaacatatcttctgtcttgaatgtgatattttcattcatgaagaatt
aaatcaatgtcccttttgtttaattaacgatacataa

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