Plasmodium falciparum HB3: PFHG_04562
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Entry
PFHG_04562 CDS
T01052
Name
(Broad) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pfh
Plasmodium falciparum HB3
Pathway
pfh03022
Basal transcription factors
pfh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PFHG_04562
09124 Replication and repair
03420 Nucleotide excision repair
PFHG_04562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfh03021
]
PFHG_04562
03400 DNA repair and recombination proteins [BR:
pfh03400
]
PFHG_04562
Transcription machinery [BR:
pfh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PFHG_04562
DNA repair and recombination proteins [BR:
pfh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PFHG_04562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Tfb4
Motif
LinkDB
All DBs
AA seq
401 aa
AA seq
DB search
MQNPQNSENKVIFVEDVVRDFDENEIFEEITGKFTWEQDVERSWNLLVENNGVLQHVSQE
NNENENKEKYRKNQGSSLRKGIFRHIIILFDMSSSMKERDLKPDRINVALECVESFLKNF
FFKNPVGHVGVVALKNSSAKLIQPFTSNVDDILNSILKERTAGLQGSPSLEEGLQIAHDL
LIDMPLYGTKEVLIMYGSIRTCDKKNILNVLELLVKSNIYVNCISIAPEMHILKHICEKS
NGFYKICSSKNSLMNEINNNAETPLWMQGMEPQLIHICFPTKKKISTQIMCSCHGKLNTD
TYVCNFCNSYTCKIPSKCKVCGIHLISMHDLSHITNNLQGSPLFIEIKNEQGNYKVCSSC
NQQLYNKIYQCTKCQHIFCLECDIFIHEELNQCPFCLINDT
NT seq
2137 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcctcaaaatagtgaaaataaagttggaaaagaataaaaatgaaataatata
cataatataataattatacattataatatttacatatatatatatatatatatatatatc
atttctttatattgttatttcaaaatgatttaatattttaaatatttcttatatataata
tttcccatttcttttattaatatatatatatatataggtcatttttgttgaagatgttgt
aagagattttgacgaaaatgaaatatttgaagagataactgggaaatttacatgggaaca
aggtatgtatgtatttatgtatatatatataaggatatataatcagggaaaaaaaaaaca
tgaagcagatattataaacatatataatgaattttatataagatatatcttattttagta
tttaattttaagtgtacataattttttttttaacattatcatatttctattggataaaaa
tatatgttaccttatccatatttcttataataatatatttatttatttctctcatatata
atatatgaatatgacttattcaaacatgcatatgattatcgatattaaaaggattaaatg
tttatattatctcatccatatatatatatatatatatatatatataacataatttgtaca
attttgcttttattaacacattagatgttgaacgatcatggaatttgctggtagaaaata
atggtgtgctacaacatgttagccaagagaataacgaaaatgaaaataaggagaaatata
gaaagaatcaaggatcttccttaaggaaaggaatattcaggtatcataaaaaaaaaaaaa
cataacatatatgtatatgtttttaactggtattatttactcatactacaattcattcta
aatatgccatttttttttttttttttttttgaacacatcatggtttttttctttaattat
aaagtgtggaaaaagggaaaaagaatagttgtttttcctttgaattacttatatatatat
acatatatatattattatttaaatattcgcagacacataatcatactatttgacatgtct
agtagtatgaaagaaagggatttaaaaccagataggataaatgtagctttagaatgtgtg
gaagtaataagatttataaaaataaaaagaaacaataaatgaaaatacatgcgtattata
tatatatatatatatatatttatttatatatttatttatttatatgatttattttattta
attttgtttgaagtcatttttaaaaaactttttcttcaaaaatcctgtcggacatgttgg
tgtagtagctttaaagaatagttcagcaaaattaatacaaccatttacatcaaatgtaga
tgatatattaaattcgatattaaaggaaagaactgcaggtcttcaaggttccccttcatt
agaagaaggattacagatagcacatgatttattaattgatatgccattatatggaacaaa
agaggttttaataatgtatggatctataagaacatgtgataagaaaaacattttaaatgt
attagagttattagtaaaaagtaatatatatgtaaattgcatttcaatagctccagaaat
gcatatattaaagcatatttgtgaaaaatcaaatggtttttataaaatatgttcaagtaa
aaattctttaatgaatgaaataaataataatgcggaaacacctttatggatgcaaggtat
ggaacctcaattaattcatatatgttttccaacaaagaaaaaaatcagtactcaaataat
gtgttcatgtcatggtaaattaaatactgatacatatgtttgtaatttttgtaatagtta
tacttgcaaaataccatccaaatgtaaagtatgtggtatacatttaatatcgatgcacga
tctttcacatattacaaataatcttcaaggttctcctttatttatagaaataaaaaatga
acaaggaaattataaagtatgttcatcatgtaaccaacaattgtataacaaaatatacca
atgtacaaaatgtcaacatatcttctgtcttgaatgtgatattttcattcatgaagaatt
aaatcaatgtcccttttgtttaattaacgatacataa
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