Pyrococcus furiosus COM1: PFC_08485
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Entry
PFC_08485 CDS
T02183
Name
(GenBank) Hef nuclease
Organism
pfi
Pyrococcus furiosus COM1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_helicase_helical
ERCC4
DEAD
Helicase_C
ResIII
HHH_2
HHH_5
HHH
UPF0758_N
HHH_3
AAA_19
Birna_VP1_thumb
nSTAND3
DUF3512
Motif
Other DBs
NCBI-ProteinID:
AFN04627
UniProt:
I6U950
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Position
complement(1538375..1540666)
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AA seq
763 aa
AA seq
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MLLRRDLIQPRIYQEVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAP
TKPLVLQHAESFRRLFNLPPEKIVALTGEKSPEERSKAWARAKVIVATPQTIENDLLAGR
ISLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQAKNPLVIGLTASPGSTPEKIMEVINNL
GIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLREMLRDALKPLAETGLLE
SSSPDIPKKEVLRAGQIINEEMAKGNHDLRGLLLYHAMALKLHHAIELLETQGLSALRAY
IKKLYEEAKAGSTKASKEIFSDKRMKKAISLLVQAKEIGLDHPKMDKLKEIIREQLQRKQ
NSKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASKENDRGLSQREQKLILDEFARGEF
NVLVATSVGEEGLDVPEVDLVVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKGTRDEA
YYWSSRQKEKIMQETIAKVSQAIKKQKQTSLVDFVREKESEKTSLDKWLKKEKEEATEKE
EKKVKAQEGVKVVVDSRELRSEVVKRLKLLGVKLEVKTLDVGDYIISEDVAIERKSANDF
IQSIIDGRLFDQVKRLKEAYSRPIMIVEGSLYGIRNVHPNAIRGAIAAVTVDFGVPIIFS
STPEETAQYIFLIAKREQEEREKPVRIRSEKKALTLAERQRLIVEGLPHVSATLARRLLK
HFGSVERVFTASVAELMKVEGIGEKIAKEIRRVITAPYIEDEE
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgttattaaggagagacttaatacagcctaggatatatcaagaggtaatatacgccaag
tgcaaagaaacaaactgcttgattgttctgcccacaggattaggtaagacgctgatagct
atgatgatagcagagtatagattaacgaaatatggcggaaaagttctaatgctcgccccc
actaagcctctcgttcttcaacatgcggaaagttttaggaggctatttaacctccctcca
gaaaaaattgtagcacttactggagagaagagcccagaagagagaagtaaggcctgggcg
agagcaaaagtaattgtagccactcctcaaactattgaaaatgacttattggcgggaaga
atatctttagaagacgtttcgctaatagtattcgatgaagctcacagagctgtgggcaat
tacgcttacgtctttatagcaagagagtataaaagacaggccaaaaacccacttgttata
gggttaacagcctcccctgggagcactcctgaaaagatcatggaggtaataaataacttg
ggaattgagcatattgaataccgctccgaaaattctcccgatgttagaccttacgttaag
ggaataaggtttgaatgggttagggttgatctcccagaaatatacaaggaagtaaggaaa
cttttaagagaaatgcttagagatgcccttaaaccgttggcagaaactggacttcttgaa
tcttcttccccagacattccaaagaaagaagttcttagagctgggcaaataataaacgaa
gaaatggcgaaaggtaatcatgatctcagaggcttgcttctctatcacgcaatggctctt
aagctacatcatgcaattgagctgttggaaacccaagggttatccgccctgagggcttat
ataaagaagttgtatgaggaggcaaaagcgggatcaacaaaggctagcaaggaaatattc
tcggataagagaatgaaaaaggcaatctcacttttagttcaagcgaaggagattgggctt
gatcaccccaagatggacaagttaaaagaaataattagggaacaactccaaaggaaacaa
aattccaaaatcatagttttcactaactacagagaaactgcaaaaaagatagtcaatgaa
cttgtgaaagatggaataaaagctaaaaggttcgttggacaggccagcaaagaaaatgac
cgtggactgagtcagagagagcagaaattaattcttgacgaattcgctagaggagaattc
aacgttctagtggcaacgagtgtaggagaggaaggacttgacgtgccggaagttgatttg
gttgtgttttatgagccagtaccatctgccataaggagcatccaaagaaggggtagaact
ggcaggcatatgccggggagagttataatcctaatggccaaggggactagagatgaagca
tactactggagttccaggcaaaaggaaaagataatgcaagagacaatagctaaggtgagt
caggcaattaaaaagcagaagcaaacttctctagttgattttgtgagagaaaaagagagc
gaaaagacctctctagacaagtggttgaaaaaggaaaaagaagaagcaactgaaaaagag
gaaaagaaggtaaaggctcaagagggtgtaaaagtcgtcgtagatagcagagagcttagg
agtgaggttgtgaagagacttaaacttcttggtgtaaagttagaggttaaaacgctcgat
gtgggagattatataattagtgaggacgttgcaattgagaggaagtcagctaacgacttc
attcagtcaattattgatggtagactttttgatcaagttaagaggctcaaagaggcatac
tcaagaccgataatgatagtcgaaggttctttatacggaattagaaacgtccatccaaat
gcaataaggggggcaatagcagcggtaaccgtagactttggggtcccaataatattttca
tctactccagaggaaaccgctcaatacatctttctaattgcaaagagggagcaagaggag
agagaaaaacctgtgagaattagaagtgagaagaaggcccttacccttgccgagaggcag
aggttaatagttgagggattacctcacgtctcagcaactctagctaggagattgttgaag
cactttggaagtgtggaaagggtattcactgcaagcgttgctgagttaatgaaagttgaa
ggcataggagagaagattgctaaggagattagaagggtaataactgccccatatatagag
gatgaggagtag
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