Pandoraea fibrosis: PI93_001920
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Entry
PI93_001920 CDS
T06385
Name
(GenBank) acetyl-CoA carboxylase biotin carboxylase subunit
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib00280
Valine, leucine and isoleucine degradation
pfib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PI93_001920
Enzymes [BR:
pfib01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
PI93_001920
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp_3
GCV_H
MCC_alpha_BT
GARS_A
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
QHF11540
LinkDB
All DBs
Position
complement(447821..449842)
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AA seq
673 aa
AA seq
DB search
MFDKILIANRGEIACRVAATAARLGIRTVAVYSDADAQAKHVAVCDEAVHVGGAAARDSY
LRIDAIIDAAKATGAQAIHPGYGFLSENEAFAAACHEAGIVFIGPPVGAIHAMGSKSAAK
TLMEGAAVPLVPGYHGDNQDAAFLHARADEIGYPVLLKASAGGGGKGMRVVERSEDFRAA
LASCQREAASSFGDERVLVEKYLTRPRHIEIQVFADTHGNCVYLFERDCSVQRRHQKVLE
EAPAPGMTEARRRSMGEAACNAARAVGYVGAGTVEFIANQDGSFYFMEMNTRLQVEHPVT
EMITGLDLVEWQLRVAAGEVLPRKQDELRIHGHALEARIYAENPDNNFLPSTGTLSTLRP
PAAVQFEIGNAGSPAAVRIDSGVREGDTISPFYDPMIAKLIVWGQDRDEALARMRRALGQ
YRVVGVQTNIAFLGRLVASEPFAGADLDTGLIERHRDTLFPAPAPVPATTLALAVAAQLS
RETVIGRRKYQDSIDHHSPWQLATGWRLNGDYQRTLSFDHGETRLDVVLTSGPQASTLTV
DAQTYPYRYAHDGGVYRVTLGERRVQGHVDFEQQAAHVFADGLSWTLRWHDPLAQAGAQE
GGEGRLTAPMPGKVIAVLAKAGTKVEKGAPLLVMEAMKMEHTISAPADGEIEEVLYAVGD
QVPEGAQLLAFKR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaagatcctcatcgccaaccgcggcgaaatcgcctgtcgcgtcgcggcaacc
gcggcacggctgggtattcgcacggtggccgtctattccgacgccgatgcccaggccaag
cacgttgccgtgtgcgacgaagcggttcacgtcggcggcgccgccgcgcgtgacagctac
ctgcgcatcgacgccatcatcgacgccgccaaagccaccggcgcacaagccattcatccc
ggttacggcttcctgtcggaaaacgaagcgtttgccgccgcatgccatgaagccggcatc
gtcttcatcggcccgccggtcggcgcgattcacgccatgggcagcaagagcgccgccaag
accctcatggaaggcgccgcagtgccgctggtgccgggttatcacggcgacaatcaggac
gccgcgttcctgcacgcgcgcgccgacgagatcggctaccccgtgttgctcaaggccagc
gcggggggtggcggcaagggcatgcgcgtggtggagcgcagcgaggatttccgcgccgcg
ctggcgtcgtgccagcgcgaagcggcgagcagcttcggcgacgagcgtgtgctcgtggag
aagtacctgacacgtccgcggcatattgaaattcaggtgttcgccgatacgcatggcaat
tgcgtctatctgttcgagcgcgactgctcggtgcaacgccggcaccagaaagtgctggaa
gaggcgcccgcgccaggcatgaccgaagcacgccgccgctcgatgggcgaggccgcctgc
aacgcggcgcgcgccgtgggctatgtcggcgccggtacggtcgagttcatcgccaatcag
gacggctcgttctacttcatggaaatgaacacgcgcctgcaagtcgagcacccggtcacg
gaaatgatcaccggcctcgatctggtggagtggcaattgcgcgtggcagccggtgaagtg
ctgccgcgcaaacaggacgaattgcgtattcacggccatgcgctcgaagcgcgtatctac
gccgagaacccggacaacaacttcctgccgtcgacgggcacgctgtccacgctgcgtccg
cccgctgcggtgcagttcgagatcggcaatgcgggctcgccggccgccgtgcgcatcgac
tcgggcgtgcgcgaaggcgacaccatctcgccgttctacgaccccatgatcgccaagctg
atcgtgtggggacaggaccgcgacgaggcgctcgcgcgcatgcgacgtgcgctgggtcag
taccgcgtcgtcggtgtgcagaccaacatcgcgttcctcggacgtctggttgccagcgag
ccgttcgccggggccgatctcgataccggtctgatcgaacgtcatcgcgacacgctgttc
cccgcgcccgcgccggtgcctgcgactacactggcgctggcggtcgccgcacaactcagc
cgcgagaccgtgatcggacgccgcaagtatcaggacagcatcgaccatcactcgccgtgg
caactcgcgaccggctggcgtctgaacggcgattaccagcgcacgctgtcgttcgatcat
ggcgagacgcgtctggacgtcgtgctcacgagcggaccgcaagccagcacactcactgtc
gacgcgcagacctatccgtatcgctacgcccacgacggcggggtgtaccgcgtgacgctc
ggcgagcggcgtgtgcagggtcacgtcgacttcgagcagcaggcggcgcacgtcttcgcc
gatggcctgtcgtggacgctgcgctggcacgatccgctggcacaggcgggggcgcaggaa
ggcggcgaaggccggctgacggcgccgatgccgggcaaggtcatcgcggtactcgcgaag
gccggcacgaaggtcgagaagggcgccccgctgctcgtgatggaagccatgaagatggag
cacaccatcagtgccccggccgacggcgagatcgaagaagtgctgtacgcggtcggcgat
caggtgcccgaaggcgcgcagttgctggcgttcaagcggtaa
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