Pandoraea fibrosis: PI93_023755
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Entry
PI93_023755 CDS
T06385
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PI93_023755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfib03400
]
PI93_023755
Enzymes [BR:
pfib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PI93_023755
DNA repair and recombination proteins [BR:
pfib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PI93_023755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
PriA_CRR
Helicase_C
zinc-ribbons_6
AAA_16
zf-CHY
ADDB_N
HypA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHF15322
LinkDB
All DBs
Position
5375142..5377619
Genome browser
AA seq
825 aa
AA seq
DB search
MTRADALSEPSCASTDDALSPVANPRTGTPAIARVALDTPLLTLFDYRLDQAASLGQLVQ
VPFGRRQVVGVVWELTQRSEVDPAKLRDVTAVWHELPPLGDDWRDLMQFAARYYQRGVGE
VALPAIPGHLRTPMRWPRLLAQRGVQRYRIADGALPTLMDNVPARLRAQRRLAEGLAQAG
TLDADEAKALCSKAADVLKQWAAAGWVTVETVPFHETIREDDEAHATHATQMDDASDAAQ
TDPGVDPVAGDTPGVTKTLTAGQADAVAAIHDALEAAGAQRLDPSPLAVEGTGEGADTPA
CAPFLLYGVTGSGKTEVYLRAVAEALRQPDAQVLVLVPEINLTPQLEGVFRKRFPDETLV
TLHSALAEGERARHWLAAHRGEARIVLGTRLAVMASLPHLRLIVVDEEHDPSYKQQEGLR
YSARDLAIWRANRLRIPVVLGSATPSLDSWRRAEQGRYVRLAMPERATPDAVLPRVSLID
MEIERKRQRAVHEGLSQPLLAAIRARFEAGEQSLLFLNRRGYAPVLNCDACGWISDCRRC
SAHMVLHKPERRLRCHHCGAESRIPHACPDCGNQDLAPLGRGTQRIEEALAEHFPDARLA
RIDADSTRRKGSAQALFAQVHAGEVDILIGTQMVAKGHDFRNVTLVGVVNADSALFSHDF
RAAERLFAQLMQVAGRAGRAARADGPGDVLIQTRYASHPLFASLMRHDYAGFAAQQLEER
RVALLPPYTHQALLRAEARRLDDAMTFLKQAREIAATPALNDPRISLWDPVPMTMVRIAG
TDRAQLVVESPHRGALQRFLTHWMGELRALKAPVRWHLEVDPLEI
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
ttgacccgcgccgacgccctgtccgaaccgtcttgcgcatcgaccgacgatgcgttgtct
ccggtagccaatccacgcaccggcacgccggcgatcgcccgcgtggcgctcgacacgccg
ctgctgacgcttttcgactaccggctcgatcaggccgcgagcctcggtcagttggtgcag
gtgccgtttggacgacgacaggtcgtaggggtcgtctgggaattgacgcagcgcagcgaa
gtcgacccggcaaaactgcgcgatgtgacagccgtctggcacgaattgccaccgctcggc
gacgactggcgcgacctgatgcaattcgcggcacgctattaccagcgcggcgtcggcgaa
gtcgcgctgcccgccatcccgggccatttgcgcacgccgatgcgctggccgcgactcctc
gctcagcgcggcgtgcagcgctaccggatcgccgacggcgccctgccaacgctcatggac
aacgtgcccgcccggttgcgggcgcagcgtcgactggccgaagggctcgcgcaagccggc
acactcgatgccgacgaggccaaagccctctgctcgaaagccgccgacgtgctcaagcaa
tgggccgccgccggatgggtcacggttgaaaccgtgccgttccacgaaacgatacgtgag
gacgatgaggcgcacgcaacgcacgcaacgcagatggatgacgcgtcggacgccgcacag
accgacccgggcgtcgatcccgtcgcgggcgacactcccggcgtcaccaaaacgctcacc
gccggacaggccgatgcggtcgcagcgattcacgacgccctcgaagcggcaggcgcccag
cgcctcgatccttcgccgctggcggttgagggcacgggcgaaggggccgacacccccgcc
tgcgcgcctttcctgctctacggcgtgaccggcagcggcaaaaccgaagtctatctgcgc
gccgtcgccgaagcgcttcgtcaacccgacgcgcaagtgctcgtcctggtgccggaaatc
aatctgacgccgcaactcgaaggcgtcttccgcaagcgattccccgacgagacgctcgtc
accctgcacagcgcactggccgaaggcgaacgcgcccggcattggctcgcggcgcatcgc
ggcgaagcgcgcatcgtcctcggcacacggctcgcggtcatggcgtcgctgccgcatctg
cgcctgatcgtcgtcgacgaagagcacgatccgtcatacaagcaacaggaaggattgcgc
tactcggcccgcgacctcgccatctggcgcgcgaaccggctgcgcattcccgtggtcctc
ggctctgccacgccgtcgctcgatagctggcgacgggccgagcagggccgctacgtgcgc
ctcgcgatgcccgagcgcgccacgcccgacgccgtgctgccacgcgtctcgctcatcgac
atggagatcgagcgaaagcgacagcgcgcagtgcacgaaggactatcgcagcccctgctc
gccgccattcgcgcgcgcttcgaagccggcgagcaaagtctgctgttcctgaatcgtcgc
ggttacgcgccggtgctcaattgcgacgcctgtggctggatcagcgactgccgccgatgc
agcgcgcacatggtgctacacaagcccgaacggcggctgcgctgccaccattgcggcgcg
gagtcgcgcattccgcatgcgtgccccgactgcggcaatcaagacctcgcgccgctggga
cgcggcacgcagcgcattgaagaagcgctggccgagcacttccccgacgcacgtctcgcc
cgcatcgacgccgacagcacgcgccgcaagggcagcgctcaggcgttgttcgcacaggtg
catgcgggagaggtcgacatcctgatcggcacgcaaatggtcgccaaggggcacgacttc
cgcaacgtcacgctcgtgggtgtggtcaacgccgacagcgcgctgttctcgcacgacttc
cgggcagccgagcgtctcttcgcacaactgatgcaagtggccggacgtgccggtcgcgcc
gcccgcgccgacggccccggcgatgtgctgatccagacacgctacgcatcccacccgttg
ttcgcgtcgctcatgcgtcacgactacgcgggcttcgccgcacaacaactggaggaacgc
cgcgtcgccctgctgccgccgtacacccatcaggcgctgctgcgcgccgaagcacggcgt
ctcgacgacgccatgacgttcctcaagcaagcccgcgaaatcgccgccacgcccgcgttg
aacgacccgcgcatttccctttgggacccggtgccgatgaccatggtgcggatcgccggc
accgaccgcgcgcagctcgtggtcgagagtccgcatcgcggcgccctgcaacgcttcctc
acgcattggatgggcgagttgcgcgcactcaaggcccccgtgcgctggcatcttgaagtc
gacccgctcgaaatataa
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