Paracoccus fistulariae: JHX87_15865
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Entry
JHX87_15865 CDS
T08856
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pfis
Paracoccus fistulariae
Pathway
pfis01501
beta-Lactam resistance
pfis01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pfis00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JHX87_15865
01503 Cationic antimicrobial peptide (CAMP) resistance
JHX87_15865
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfis02000
]
JHX87_15865
01504 Antimicrobial resistance genes [BR:
pfis01504
]
JHX87_15865
Transporters [BR:
pfis02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JHX87_15865
Antimicrobial resistance genes [BR:
pfis01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JHX87_15865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
SmpA_OmlA
ERF
Patched
Motif
Other DBs
NCBI-ProteinID:
WCR06925
LinkDB
All DBs
Position
complement(3201853..3204999)
Genome browser
AA seq
1048 aa
AA seq
DB search
MISDFFIRRIRFAIVVSTVISIVGAIALFALPIQQYPDITPPTVTVSTVYPGASAETVAD
VIGGPIESAVNGVDDMTYMSSTSSNAGQYSLSVTFDIGTDPDQAQVNVQNRVQLATSSLP
SEVQQQGVQVRARSPDFLLSLGFYSADGQMDDLSVANYVNTTLIDEVVRVSGVGDASAIG
TSEYAMRVWLDTPKMVALGVTADEVAAAIRSQNVQAALGELGGPPAPEGTEVQFTLVSQG
RLAEPEQFSRLILRTGDDGSVVRLGDVARIELGAQSYAVQAKLGDYNSTMMQVNLAPGAN
ALETRQAVLDLMEQKQSSFPKDLAYATVYDATLFVSSSIELIMDILVEAFIIVMVVIFLF
LQDWRATIVAGVSIPVSLLGAMAVLLMLGYSLNMISLLALVLAIGLVVDDAILVVENVQH
NLEEDPYMSVAEASRKAMAQITGPIISTTFVLLAVVVPTGFLPGINGQLFRQFAVTISGG
LVMSAIVAVTLSPAMAAVMLRAPKGGKRRGPLAWIESGLNWLRDGYGRIVGFMLRFWLLP
LGILAACAAGAAYLITSLPSTFLPDEDQGALFVNVQLPDAASLQRTDEIMALVRDELGQT
PGVEEVISVSGYSILQGTAAPNGGMAIAALTPWEERQSEETQLGAILGSLNQRFSQVPGA
SIAAFSPPPIPGVGTVGGLDMRLQALEGQSPDELAQTLRSFLATANQDPAIGGLSSTFSA
DVPQVYLNVDRVRAERLGLSPSDIYSAIGSAFGSSYINDFTTGGRNYQVTIAADGQYRAD
IDDLMNLYIRSDSGAMVPLRTLASTTTVLGPYVITRFNQSVSATVNGQAAPGASSGSAMA
ASERIAQETLPEGYGVAWSGLSYQEQQGGGGQYLTYVMSLIFAYLFLVALYESFSLPIAI
LLSLGAAAFGAGLGLVITNTQMSLYVQVALVLLIGLAAKNAILIVEFAKERREEGMPVFE
AARQGAEARFRAVLMTALAFIFGVLPLAESHGAGAGAQNAVGITIISGMLGATLIGLFII
PSLYFVIQSVTEWMADRFGKAGSKSLEG
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgatctcggatttcttcatcaggcggatccgctttgccatcgtcgtctcgacggtgatt
tcgattgtcggggcgattgcgctgtttgccctgccgatccagcaatatcccgatatcacc
ccgccgaccgtcaccgtctcgaccgtctatccgggggccagcgcggaaaccgtcgcggat
gtgatcggcgggccgattgaatcagcggtgaatggcgtcgatgacatgacctatatgtcc
tcgaccagttccaatgccgggcaatattcgctgtcggtgaccttcgatatcggcaccgat
cccgatcaggcacaggtcaatgtgcagaaccgggtgcagcttgcgacctccagcctgcca
agtgaggtgcagcagcagggcgtgcaggtgcgcgcccgctcacccgatttcctgctgtcg
cttgggttttattcggcggatggccagatggacgatctgtcggtggccaattacgtcaac
accaccctgattgatgaggtcgtgcgggtcagcggcgtcggcgatgcctcggccatcggg
acgtcggaatatgcgatgcgggtctggctggacacaccgaagatggtggcgcttggcgtc
accgccgatgaggtcgccgccgcgatccgcagtcagaacgtgcaggccgccctgggcgag
cttggcggcccgcccgcccccgaaggcaccgaggtgcagttcacgctggtttcgcaaggc
cgtctggccgaaccagagcagttttcgcggctgatcctgcgcaccggcgacgacggcagc
gtggtccggctgggcgatgtggcgcggatcgagttgggcgcgcaatcctatgcagtgcag
gccaagctgggcgactataattcgaccatgatgcaggtcaatctggcacccggcgccaat
gcgctggaaacgcggcaggccgtgctggatctgatggaacagaagcagtccagctttccg
aaggatctggcctatgcgaccgtctatgacgccacgctgttcgtcagctccagtatcgag
ctgatcatggatatcctggtcgaggcttttatcatcgtcatggtggtgatcttcctgttc
ctgcaggattggcgggcgaccatcgtggcgggggtgtccatcccggtctcgcttctgggc
gcgatggcggtgctgctgatgctgggctattcgctgaacatgatctcgcttctggcgctg
gttctggccatcgggctggtggtggatgacgccattctggtggtcgagaatgtccagcac
aatctggaagaagacccctacatgtcggtggccgaggcatcgcgaaaggccatggcacag
atcaccgggccgatcatctcgaccacattcgtgttgctggccgtggtggtgccgaccggc
ttcctgcccggcatcaacggccagttgttccgccaattcgcggtcacgatctcgggcggg
ctggtgatgtcggccattgtcgcggtcacgcttagccccgccatggcggccgtgatgctg
cgcgcgccgaaaggggggaaacgtcgcggcccgctggcctggatcgaatccgggctgaac
tggctgcgcgacggctatggcaggatcgtgggctttatgctgcgcttctggctgctgccg
ctgggcattctggccgcctgcgccgctggcgccgcctatctgatcacctcgctgcccagc
accttcctgcccgacgaggatcagggcgcgctcttcgtcaatgtccagcttcccgatgcg
gcatcgttgcagcgcacggatgagatcatggcccttgtgcgggacgagcttgggcagacg
ccgggcgtggaagaggtgatttcggtatccggctacagcatcctgcagggcaccgccgcg
ccgaatggcggcatggccatcgccgccctgaccccttgggaagaacgtcagagcgaagag
acacagttgggcgcgatcctgggatcgctgaaccagcggttcagccaggtgcccggcgcc
agcatcgccgccttttcgccgccgccgatccccggtgttggcaccgtgggcggtctggac
atgcgcctgcaggcgctggaagggcagtccccggatgagcttgcccagacgctcagatcc
tttctggcgaccgccaatcaggatccggccatcggcgggctcagctcgaccttcagcgcg
gatgtgccgcaggtctatctgaacgtggaccgggtccgggcagagcgtctggggcttagc
ccctcggatatctacagcgcgatcggatcggccttcgggtccagctatatcaacgatttt
accaccggcgggcggaattatcaggtcaccatcgcggcggatggccaatatcgcgccgat
atcgacgatctgatgaacctctatatccgcagcgacagcggtgcgatggtgcccttgcgc
acgctggcctcgaccacgacggtgcttggcccctatgtgatcacgcgcttcaatcagtcg
gtctcggccacggtgaacggtcaggccgcgcccggggccagttccggctctgccatggcg
gccagcgaacgcatcgcccaggaaaccttgcccgaaggctatggcgtcgcctggtccggc
ctgtcctatcaggaacagcagggcggcggcgggcaatacctgacctatgtgatgtcgctg
atcttcgcctatctgttcctcgtggcactgtatgaaagcttttcgctgcccattgcgatc
cttctgtcgctgggcgcggcggcctttggggccgggcttgggctggtcatcaccaatacg
cagatgagcctttatgtgcaggtcgcgctggtgctgctgatcggtctggcggccaagaac
gccatcctgatcgtcgaattcgccaaggagaggcgggaagagggcatgcccgtcttcgag
gccgcccggcagggcgccgaggcgcggttccgcgccgtgctgatgacggcgctggccttt
atcttcggcgtgctgcctttggcggaatcccatggcgcgggcgcgggtgcgcagaatgcc
gtgggcatcaccatcatcagcggcatgttgggggcgacactgatcgggctgttcatcatc
ccgtcgctgtatttcgtgattcaaagcgtgacggaatggatggccgacaggttcggcaag
gccggatcgaagtcgctggagggctga
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