Pseudomonas fitomaticsae: KJY40_02420
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Entry
KJY40_02420 CDS
T08740
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit00521
Streptomycin biosynthesis
pfit00523
Polyketide sugar unit biosynthesis
pfit00541
O-Antigen nucleotide sugar biosynthesis
pfit01100
Metabolic pathways
pfit01110
Biosynthesis of secondary metabolites
pfit01250
Biosynthesis of nucleotide sugars
Module
pfit_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
KJY40_02420 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KJY40_02420 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KJY40_02420 (rfbC)
Enzymes [BR:
pfit01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
KJY40_02420 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UFQ00562
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All DBs
Position
complement(544975..545520)
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AA seq
181 aa
AA seq
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MNVITTDLPGVLIIEPKVFGDERGFFYESFNAKAFQEATGLDTQFVQDNHSRSQKGVLRG
LHYQLENTQGKLVRVTVGEVLDVAVDIRRSSPNFGKWVAVRLSADNHRQLWVPEGFAHGF
VVLSEFAEFLYKTTNYYNPSSERSIRWDDPDLGIDWQLDEAPKLSAKDQAGAFLKDADVF
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaatcaccaccgacctgcctggtgtcctgatcatcgaacccaaggtgttcggt
gacgagcgcgggttcttttacgaaagcttcaacgccaaggctttccaggaagcgaccggc
ctcgacacgcaatttgtccaggacaaccactcccgctcgcagaaaggcgtgctgcgcggc
ctgcactatcagctggaaaatacccagggcaaactggttcgcgtcaccgtgggtgaagtg
ctcgacgtcgcggtcgatatccgccgcagctcgccgaacttcggcaagtgggtcgctgtg
cgcctgtccgccgacaaccaccgtcaactgtgggtaccggaaggtttcgcccacggtttc
gtggtgctgagcgagttcgccgaattcctctacaagaccaccaactactacaacccgtct
tccgagcggagcattcgctgggacgacccggacctgggcatcgactggcagctggacgaa
gcgccaaaactgtcggccaaggatcaggcaggcgccttcctcaaggacgccgacgttttt
tcctga
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